RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ASCC1Q8N9N2 400 aaKnown RBP18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 NINJ1Q92982 152 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 GAFA1Q96PS6 74 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 RAB1BQ9H0U4 201 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 LGALS8O00214 317 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 SCTP09683 121 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 TBPP20226 339 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 MEF2DQ14814 521 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 CHRFAM7AQ494W8 412 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 VAX1Q5SQQ9 334 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 BTN2A1Q7KYR7 527 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 TPRX1Q8N7U7 411 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 OR13C8Q8NGS7 320 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 OR5H2Q8NGV7 314 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 IGFBPL1Q8WX77 278 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 SDSLQ96GA7 329 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 NUDT15Q9NV35 164 aa18.3■□□□□ 0.52
PACSIN3-209ENST00000532457 PPIAL4EA0A075B759 164 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 PPIAL4DF5H284 164 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 NDUFS7O75251 213 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 RP2O75695 350 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 NDUFB6O95139 128 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 PPIAL4FP0DN26 164 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 MDH2P40926 338 aaKnown RBP18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 GLIPR1P48060 266 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 C11orf91Q3C1V1 193 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 ZNF788Q6ZQV5 615 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 Q6ZS49 121 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 FGFRL1Q8N441 504 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 RIMS4Q9H426 269 aaPredicted RBP18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 PPIAL4AQ9Y536 164 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 KIAA2026Q5HYC2 2103 aa18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 ANKRD17O75179 2603 aaKnown RBP18.29■□□□□ 0.52
PACSIN3-209ENST00000532457 K7N7A8 449 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 OVOL3O00110 214 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 FCN3O75636 299 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 OR3A3P47888 321 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 GRK1Q15835 563 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 SRSF7Q16629 238 aaKnown RBP eCLIP18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 HFEQ30201 348 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 SCGB2B2Q4G0G5 96 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 IGSF11Q5DX21 431 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 IDO2Q6ZQW0 420 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 C1orf87Q8N0U7 546 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 SNX22Q96L94 193 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 ZNF286AQ9HBT8 521 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 KIF25Q9UIL4 384 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 NUBP2Q9Y5Y2 271 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 IGKV1-6A0A0C4DH72 117 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 DISC1C4P0D8 188 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 INMT-MINDY4F8WBC2 141 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 TAS2R46P59540 309 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 CDK10Q15131 360 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 ZMYND11Q15326 602 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 ATPAF1Q5TC12 328 aaPredicted RBP18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 SLC35E4Q6ICL7 350 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 LYPD2Q6UXB3 125 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 FAM216BQ8N7L0 139 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 CREB3L1Q96BA8 519 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 EHFQ9NZC4 300 aa18.28■□□□□ 0.52
PACSIN3-209ENST00000532457 POLQO75417 2590 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 TRAV38-1A0A0B4J264 116 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 FUOMA2VDF0 154 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 TRDCB7Z8K6 153 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 TK1P04183 234 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 HERPUD1Q15011 391 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 ACTBL2Q562R1 376 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 ZNF660Q6AZW8 331 aaPredicted RBP18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 GINS4Q9BRT9 223 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 DCTN5Q9BTE1 182 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 TMPRSS13Q9BYE2 586 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 C20orf85Q9H1P6 137 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 SLC2A8Q9NY64 477 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 COPZ2Q9P299 210 aa18.27■□□□□ 0.52
PACSIN3-209ENST00000532457 MEX3AA1L020 520 aaKnown RBP18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 IFNA6P05013 189 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 BCAP31P51572 246 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 ARPC4P59998 168 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 KRBOX4Q5JUW0 171 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 CADM3Q8N126 398 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 ZNF561Q8N587 486 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 MBNL3Q9NUK0 354 aaKnown RBP18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 ARPC1BO15143 372 aaKnown RBP18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 H2AFB2P0C5Z0 115 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 OR5H8P0DN80 308 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 CARTPTQ16568 116 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 NEU4Q8WWR8 484 aaPredicted RBP18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 TMEM246Q9BRR3 403 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 BEX2Q9BXY8 128 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 ZNF665Q9H7R5 613 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 BEX1Q9HBH7 125 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 BEX4Q9NWD9 120 aaPredicted RBP18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 TRAPPC2LQ9UL33 140 aa18.26■□□□□ 0.51
PACSIN3-209ENST00000532457 SETXQ7Z333 2677 aaKnown RBP18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 NAV2Q8IVL1 2488 aa18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 TMEM30CPA0ZSE6 113 aa18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 EDDM3AQ14507 147 aa18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 RBMS2Q15434 407 aaKnown RBP18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 AADACL3Q5VUY0 350 aa18.25■□□□□ 0.51
PACSIN3-209ENST00000532457 UBALD1Q8TB05 177 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms