RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ITGB1BP2Q9UKP3 347 aa10.35□□□□□ -0.75
COPB1-208ENST00000532088 FLNBO75369 2602 aaKnown RBP10.35□□□□□ -0.75
COPB1-208ENST00000532088 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 A0A1W2PPH5 198 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 hADV38S2A0JD32 116 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 FAM25AB3EWG3 89 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 FAM25CB3EWG5 89 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 FAM25GB3EWG6 89 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 FAM157AC9JC47 383 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 TFF1P04155 84 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 NDUFB7P17568 137 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 GATA3P23771 443 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.75
COPB1-208ENST00000532088 IL2RGP31785 369 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 SEC61A1P61619 476 aaKnown RBP10.34□□□□□ -0.75
COPB1-208ENST00000532088 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
COPB1-208ENST00000532088 CR1LQ2VPA4 569 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 KRBOX4Q5JUW0 171 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 HACD4Q5VWC8 232 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 METAP1DQ6UB28 335 aaPredicted RBP10.34□□□□□ -0.75
COPB1-208ENST00000532088 BTN2A1Q7KYR7 527 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 ZNF554Q86TJ5 538 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 LY6G5BQ8NDX9 201 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 OR6Q1Q8NGQ2 317 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 CORO2AQ92828 525 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 DACT3Q96B18 629 aaPredicted RBP10.34□□□□□ -0.75
COPB1-208ENST00000532088 COQ2Q96H96 371 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 SULT4A1Q9BR01 284 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 FAAP24Q9BTP7 215 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 CHST6Q9GZX3 395 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 OR6C3Q9NZP0 311 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 EXTL2Q9UBQ6 330 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 MGAT4AQ9UM21 535 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 KCNK7Q9Y2U2 307 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 AKAP9Q99996 3911 aa10.34□□□□□ -0.75
COPB1-208ENST00000532088 TRAV20A0A0B4J274 112 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 NAPSAO96009 420 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 MSMBP08118 114 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 DTYMKP23919 212 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 ETV6P41212 452 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 TAS2R20P59543 309 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 RPL31P62899 125 aaKnown RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 MRPS10P82664 201 aaKnown RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 PAX2Q02962 417 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 AESQ08117 197 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 ATXN7L3Q14CW9 347 aaPredicted RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 CDNFQ49AH0 187 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 ZNF880Q6PDB4 577 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 TRAT1Q6PIZ9 186 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 MOB1BQ7L9L4 216 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 BPIFB2Q8N4F0 458 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 PLPPR1Q8TBJ4 325 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 NEK7Q8TDX7 302 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 C12orf4Q9NQ89 552 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 MBNL3Q9NUK0 354 aaKnown RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 TAS2R3Q9NYW6 316 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 OPN4Q9UHM6 478 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 RPUSD1Q9UJJ7 312 aaKnown RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 UBE2J1Q9Y385 318 aaPredicted RBP10.33□□□□□ -0.76
COPB1-208ENST00000532088 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
COPB1-208ENST00000532088 TRAV18A0A075B6X5 111 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 IGHV2-70DA0A0C4DH43 119 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 KIR2DS1A0A191URI9 304 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 ODAMA1E959 279 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 UBE2QL1A1L167 161 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 SULT1C2O00338 296 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 HSPB6O14558 160 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CTDSPLO15194 276 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
COPB1-208ENST00000532088 RBP4P02753 201 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 MT-ND4P03905 459 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CD3GP09693 182 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 IGHV4-31P0DP07 118 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 FOSL1P15407 271 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 GNB3P16520 340 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 GZMHP20718 246 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
COPB1-208ENST00000532088 TNFSF8P32971 234 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CBX5P45973 191 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 EDDM3BP56851 147 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 MRPS15P82914 257 aaKnown RBP10.32□□□□□ -0.76
COPB1-208ENST00000532088 PYHIN1Q6K0P9 492 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 Q6ZS49 121 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CCDC190Q86UF4 302 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 ZNF565Q8N9K5 539 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 OR4M1Q8NGD0 313 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 DIRAS2Q96HU8 199 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 CMSS1Q9BQ75 279 aaKnown RBP10.32□□□□□ -0.76
COPB1-208ENST00000532088 SOSTQ9BQB4 213 aa10.32□□□□□ -0.76
COPB1-208ENST00000532088 LINC00574Q9H8X3 128 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms