RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SAT2Q96F10 170 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 SEC22AQ96IW7 307 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 EAF1Q96JC9 268 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 TRIB1Q96RU8 372 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 CABLES2Q9BTV7 478 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 ZNF471Q9BX82 626 aaPredicted RBP4.74□□□□□ -1.65
PCF11-205ENST00000530906 OR51I2Q9H344 312 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PIGMQ9H3S5 423 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 SLC2A9Q9NRM0 540 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 SDHAF2Q9NX18 166 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 NSG2Q9Y328 171 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 CSAG2Q9Y5P2 127 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 ZNF407Q9C0G0 2248 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 PTPRBP23467 1997 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 WDR87Q6ZQQ6 2873 aa4.74□□□□□ -1.65
PCF11-205ENST00000530906 FREM1Q5H8C1 2179 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 IGKV1D-8A0A087WSZ0 117 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 A0A1B0GWJ7 208 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 I3L521 148 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 GPR31O00270 319 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 FGF16O43320 207 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 DEDDO75618 318 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 JTBO76095 146 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 SPDEFO95238 335 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 NGFP01138 241 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 IGLV1-44P01699 117 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 PLA2G1BP04054 148 aaKnown RBP4.73□□□□□ -1.65
PCF11-205ENST00000530906 FGF2P09038 288 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 SLC25A6P12236 298 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 MMP9P14780 707 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 PRKACAP17612 351 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 KITLGP21583 273 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 IGHV1-2P23083 117 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 DUSP1P28562 367 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 OPRM1P35372 400 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 NPBWR2P48146 333 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 LUMP51884 338 aaPredicted RBP4.73□□□□□ -1.65
PCF11-205ENST00000530906 FOXG1P55316 489 aaPredicted RBP4.73□□□□□ -1.65
PCF11-205ENST00000530906 UCP2P55851 309 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 ERVK11-1P61568 191 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 PAX5Q02548 391 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TMEM187Q14656 261 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 ZNF146Q15072 292 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 C3AR1Q16581 482 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 LRRC37A5PQ49AS3 106 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 KRTCAP3Q53RY4 240 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 ATP1A1-AS1Q5TC04 95 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 C9orf135Q5VTT2 229 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 HAGHLQ6PII5 290 aaPredicted RBP4.73□□□□□ -1.65
PCF11-205ENST00000530906 ALKAL2Q6UX46 152 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 Q6ZS92 163 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 RTN4RL2Q86UN3 420 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 VASH2Q86V25 355 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 LDLRAD3Q86YD5 345 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 FAM90A1Q86YD7 464 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 MAFIPQ8WZ33 124 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TOMM40LQ969M1 308 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 SLAMF9Q96A28 289 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 AKR1E2Q96JD6 320 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TMEM56Q96MV1 263 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 NRIP2Q9BQI9 281 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 HDHD3Q9BSH5 251 aaPredicted RBP4.73□□□□□ -1.65
PCF11-205ENST00000530906 RNF126Q9BV68 326 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TMEM222Q9H0R3 208 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TMEM100Q9NV29 134 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 MTCH1Q9NZJ7 389 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 PROCRQ9UNN8 238 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 SPEF1Q9Y4P9 236 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 TMEM56-RWDD3S4R434 201 aa4.73□□□□□ -1.65
PCF11-205ENST00000530906 MED12LQ86YW9 2145 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 RTTNQ86VV8 2226 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 BORCS7-ASMTA0A0B4J1R7 106 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 CLEC18AA5D8T8 446 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 OR5H1A6NKK0 313 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 RNF212BA8MTL3 300 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 PROB1E7EW31 1015 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 H0Y980 276 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 K7EPK0 472 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 IFNL4K9M1U5 179 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 SH2D1BO14796 132 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 MPPED1O15442 326 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 ST8SIA3O43173 380 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 ADAP1O75689 374 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 PGA5P0DJD9 388 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 PVALBP20472 110 aaPredicted RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 AADACP22760 399 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 CA6P23280 308 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 UCP1P25874 307 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 TIMP3P35625 211 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 CD200P41217 278 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 P2RY1P47900 373 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 NOVA1P51513 510 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 IDH3GP51553 393 aaPredicted RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 RPS23P62266 143 aaKnown RBP4.72□□□□□ -1.65
PCF11-205ENST00000530906 BLOC1S1P78537 153 aa4.72□□□□□ -1.65
PCF11-205ENST00000530906 HLA-DRB3P79483 266 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms