RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 DPF1Q92782 380 aa16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 FAM192AQ9GZU8 254 aa16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 PCDHB16Q9NRJ7 776 aa16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 DHDHQ9UQ10 334 aa16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
TSPAN4-219ENST00000530404 LINC01548A6NM66 108 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 SERPINE3A8MV23 424 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 E9PQ18 207 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 C21orf33P30042 268 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 RASSF2P50749 326 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 MADCAM1Q13477 382 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 PARP16Q8N5Y8 322 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 OR5AK2Q8NH90 309 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 CHPT1Q8WUD6 406 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 TNFAIP8L1Q8WVP5 186 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 GPER1Q99527 375 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 AMBNQ9NP70 447 aa16.38■□□□□ 0.21
TSPAN4-219ENST00000530404 IGHV3-72A0A0B4J1Y9 119 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 CIB2O75838 187 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 HTR3BO95264 441 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 REG1BP48304 166 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 SOX2P48431 317 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 ELP2Q6IA86 826 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 PXT1Q8NFP0 134 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 UBALD1Q8TB05 177 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 BARHL1Q9BZE3 327 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 TAS2R4Q9NYW5 299 aa16.37■□□□□ 0.21
TSPAN4-219ENST00000530404 TMEM212A6NML5 194 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 NPIPB11E5RHQ5 1161 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 GABRB1P18505 474 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 RAB7AP51149 207 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 IL13RA2Q14627 380 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 FAM53AQ6NSI3 398 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 SYS1Q8N2H4 156 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 OR10X1Q8NGY0 326 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 RBMXL1Q96E39 390 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 MRPL48Q96GC5 212 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 ERVK13-1Q9NX77 482 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 GMPPBQ9Y5P6 360 aa16.36■□□□□ 0.21
TSPAN4-219ENST00000530404 SNTNA6NMZ2 147 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 HSD17B6O14756 317 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 FGF16O43320 207 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 CDRT1O95170 752 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 RAB3AP20336 220 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 ALDH3A2P51648 485 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 GTF2A1P52655 376 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 RAB25P57735 213 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 RSU1Q15404 277 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 LCNL1Q6ZST4 164 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 MOB3BQ86TA1 216 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 OR8H3Q8N146 312 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 STPG2Q8N412 459 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 SUMF2Q8NBJ7 301 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 HAVCR2Q8TDQ0 301 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 RGP1Q92546 391 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 B9D2Q9BPU9 175 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 GPR61Q9BZJ8 451 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 LINC00574Q9H8X3 128 aa16.35■□□□□ 0.21
TSPAN4-219ENST00000530404 MAGEB3O15480 346 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 ATP5HO75947 161 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 IGHG2P01859 326 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 MYCNOSP40205 109 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 P2RX4Q99571 388 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 DPCDQ9BVM2 203 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 NCOR1P1Q9H4R4 102 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 ING4Q9UNL4 249 aa16.34■□□□□ 0.21
TSPAN4-219ENST00000530404 IGHV3-43A0A0B4J1X8 118 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 IGHV1-3A0A0C4DH29 117 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 H3BNX3 289 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 RPSAP08865 295 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 IGHV3-43DP0DP04 118 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 GBX2P52951 348 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 SLC35B1P78383 322 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 DEFB136Q30KP8 78 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 ZNF529Q6P280 563 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 CBR4Q8N4T8 237 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 OR52I1Q8NGK6 324 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 TFAP2CQ92754 450 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 MCRIP2Q9BUT9 160 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 JAM3Q9BX67 310 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 ZFP57Q9NU63 452 aa16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 HUWE1Q7Z6Z7 4374 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-219ENST00000530404 NCBP2LA6PVI3 153 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 CCRL2O00421 344 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 ZNF816Q0VGE8 651 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 XAF1Q6GPH4 301 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 ZNF695Q8IW36 515 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 FOXRED2Q8IWF2 684 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 CCDC107Q8WV48 283 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 ORAI1Q96D31 301 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 RAX2Q96IS3 184 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 EAF1Q96JC9 268 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 FAM118AQ9NWS6 357 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 ST3GAL6Q9Y274 331 aa16.32■□□□□ 0.2
TSPAN4-219ENST00000530404 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 OR7C1O76099 320 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-219ENST00000530404 FADS2O95864 444 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms