RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 LUZP4Q9P127 313 aa13.5□□□□□ -0.25
TM9SF1-208ENST00000529332 LIPGQ9Y5X9 500 aa13.5□□□□□ -0.25
TM9SF1-208ENST00000529332 ZNF98A6NK75 572 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 CCL2P13500 99 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 UCNP55089 124 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 ARF1P84077 181 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 PAPOLGQ9BWT3 736 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 A0A096LPE4 126 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 A0A1W2PPZ6 126 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 TRDCB7Z8K6 153 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 K7ENP7 123 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 IGHG3P01860 377 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 CCNOP22674 350 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 FOXG1P55316 489 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 EWSR1Q01844 656 aaKnown RBP eCLIP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 INO80CQ6PI98 192 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 COMMD1Q8N668 190 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 GPHA2Q96T91 129 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 REPIN1Q9BWE0 567 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 RNF122Q9H9V4 155 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 IL36RNQ9UBH0 155 aa13.49□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM24AA6NFZ4 105 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 SCTP09683 121 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 PRDX4Q13162 271 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 DPPA2Q7Z7J5 298 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 C14orf79Q96F83 325 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 Q9N2K0 584 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 COA4Q9NYJ1 87 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 RFNGQ9Y644 331 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 IGKV3D-15A0A087WSY6 115 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 NAPSAO96009 420 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 PRH1P02810 166 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 FOLR2P14207 255 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 PAX6P26367 422 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 HAAOP46952 286 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 GPM6AP51674 278 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 TMPRSS3P57727 454 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 HABP2Q14520 560 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 GNMTQ14749 295 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 HERPUD1Q15011 391 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 HMGN3Q15651 99 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 NRN1LQ496H8 165 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 Q6ZS49 121 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 Q6ZS92 163 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 EGLN1Q9GZT9 426 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 EIF5A2Q9GZV4 153 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 RPS10P5Q9NQ39 176 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 DCHS1Q96JQ0 3298 aa13.48□□□□□ -0.25
TM9SF1-208ENST00000529332 CELSR3Q9NYQ7 3312 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 IGKV1D-13A0A0B4J2D9 117 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 IGSF23A1L1A6 192 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A18PA6NE21 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A16PA6NEW6 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A20PA6NIJ5 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A12PA8MX19 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A5PA8MXJ8 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 CDS2O95674 445 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 HLA-HP01893 362 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A15PP0C7V4 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A13PP0C7W8 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A14PP0C7W9 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM90A24PP0C7X0 464 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 IGKV1-13P0DP09 117 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 TMEM182Q6ZP80 229 aaPredicted RBP13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 ZNF818PQ6ZRF7 136 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 SELENOHQ8IZQ5 122 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 FAM185AQ8N0U4 392 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 OR2C3Q8N628 320 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 C15orf54Q8N8G6 183 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 TMEM56Q96MV1 263 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 SPACA1Q9HBV2 294 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 SPRR3Q9UBC9 169 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 STRAPQ9Y3F4 350 aaKnown RBP13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 TMEM56-RWDD3S4R434 201 aa13.47□□□□□ -0.25
TM9SF1-208ENST00000529332 C5orf49A4QMS7 147 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 K7N7A8 449 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 PPP1CCP36873 323 aaKnown RBP13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 RAB5CP51148 216 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 FGF12P61328 243 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 RNPS1Q15287 305 aaKnown RBP13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 TSC22D1Q15714 1073 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 SPIN3Q5JUX0 258 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 HIST1H2BAQ96A08 127 aa13.46□□□□□ -0.25
TM9SF1-208ENST00000529332 MTCH1Q9NZJ7 389 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms