RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TRAPPC13A5PLN9 417 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR5H1A6NKK0 313 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CORTO00230 105 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 TAAR5O14804 337 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DEGS1O15121 323 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 MFSD11O43934 449 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 TRAPPC6AO75865 159 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR7C1O76099 320 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 CATP04040 527 aaKnown RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 SEMG1P04279 462 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L2P0CJ85 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L3P0CJ86 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L5P0CJ88 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L6P0CJ89 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L7P0CJ90 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR5H8P0DN80 308 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR13C7P0DN81 318 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CD79AP11912 226 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ZBTB25P24278 435 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 FASP25445 335 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 LOXP28300 417 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 RPL12P30050 165 aaKnown RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 KLK7P49862 253 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 SSR4P51571 173 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ZNF133P52736 654 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 RAB5BP61020 215 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 RPL31P62899 125 aaKnown RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 HBA1P69905 142 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 RUNX1Q01196 453 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 PLCXD2Q0VAA5 305 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 GUSBP1Q15486 140 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 NEDD8Q15843 81 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 HIST3H3Q16695 136 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 LTC4SQ16873 150 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 SCGB2B2Q4G0G5 96 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CCSMST1Q4G0I0 132 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 AVPI1Q5T686 147 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 FAM162BQ5T6X4 162 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 HIST2H3PS2Q5TEC6 136 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 TMEM215Q68D42 235 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 LAMTOR1Q6IAA8 161 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4L9Q6RFH8 374 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 UGT2A3Q6UWM9 527 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 WDR82Q6UXN9 313 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 MOB1BQ7L9L4 216 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 HSD17B13Q7Z5P4 300 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 UBALD2Q8IYN6 164 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 H1FOOQ8IZA3 346 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 UMODL1-AS1Q8N2C9 162 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 MUC15Q8N387 334 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CBR4Q8N4T8 237 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 TMEM252Q8N6L7 170 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 PACRGLQ8N7B6 248 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 POM121L12Q8N7R1 296 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 UBAC2Q8NBM4 344 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CHST4Q8NCG5 386 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR4E2Q8NGC2 313 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR10G4Q8NGN3 311 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR13C6PQ8NH95 151 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 IL22RA2Q969J5 263 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ROPN1LQ96C74 230 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ADTRPQ96IZ2 230 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 SMIM8Q96KF7 97 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CNBD2Q96M20 576 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 RBP7Q96R05 134 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ATOH8Q96SQ7 321 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ZNF184Q99676 751 aaPredicted RBP2.48□□□□□ -2.01
CD44-229ENST00000528672 RARRES2Q99969 163 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 SULT4A1Q9BR01 284 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 C19orf24Q9BVV8 132 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 SUCNR1Q9BXA5 334 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 HES7Q9BYE0 225 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 OR51J1Q9H342 316 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CWH43Q9H720 699 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 ZDHHC11Q9H8X9 412 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 MED29Q9NX70 200 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 MED11Q9P086 117 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 DUX4Q9UBX2 424 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 HSPB8Q9UJY1 196 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 TRAPPC4Q9Y296 219 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 WSB1Q9Y6I7 421 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 U3KQ87 197 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 FMN1Q68DA7 1419 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 UACAQ9BZF9 1416 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 PALLDQ8WX93 1383 aa2.48□□□□□ -2.01
CD44-229ENST00000528672 CCDC18Q5T9S5 1454 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 IGHV3OR16-13A0A075B7E8 117 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 TRAV30A0A087WSZ9 112 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 A0A087WWV3 80 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 A0A0J9YY10 115 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 A0A1B0GX78 115 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 MAP1LC3B2A6NCE7 125 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 RBMY1BA6NDE4 496 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 RBMY1EA6NEQ0 496 aaKnown RBP2.47□□□□□ -2.01
CD44-229ENST00000528672 OR4C46A6NHA9 309 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 ZNF726A6NNF4 738 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 HCRTR1O43613 425 aa2.47□□□□□ -2.01
CD44-229ENST00000528672 FAM189A1O60320 539 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms