RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SLC25A10Q9UBX3 287 aaPredicted RBP10.09□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 H3BUI4 141 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GLAP06280 429 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 USF1P22415 310 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TAS2R20P59543 309 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ATXN7L3Q14CW9 347 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF260Q3ZCT1 412 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TMEM69Q5SWH9 247 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 WDR25Q64LD2 544 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NLRC3Q7RTR2 1065 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CIARTQ8N365 385 aaPredicted RBP10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NEK7Q8TDX7 302 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 COQ2Q96H96 371 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 REG4Q9BYZ8 158 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 AUNIPQ9H7T9 357 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ING3Q9NXR8 418 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 AK3Q9UIJ7 227 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MTORP42345 2549 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TMEM235A6NFC5 223 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MGST3O14880 152 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PHF1O43189 567 aaPredicted RBP10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LYRM1O43325 122 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CSN2P05814 226 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRAPPC2P0DI81 140 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRAPPC2BP0DI82 140 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NDUFB7P17568 137 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 AESQ08117 197 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RBM39Q14498 530 aaKnown RBP10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 EDDM3AQ14507 147 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LRRC10Q5BKY1 277 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TPRX1Q8N7U7 411 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 OR5D13Q8NGL4 314 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PPP1R35Q8TAP8 253 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 HDHD3Q9BSH5 251 aaPredicted RBP10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CLN8Q9UBY8 286 aa10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MRPS7Q9Y2R9 242 aaKnown RBP10.07□□□□□ -0.8
TRAF3IP2-211ENST00000528599 FAM157AC9JC47 383 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZFP36P26651 326 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GLIPR1P48060 266 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 KCNJ3P48549 501 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 INPP1P49441 399 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MRPS10P82664 201 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LOXL1Q08397 574 aaPredicted RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MAPK1IP1LQ8NDC0 245 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GCDHQ92947 438 aaPredicted RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 RAB39BQ96DA2 213 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C7orf50Q9BRJ6 194 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SSBP3Q9BWW4 388 aaPredicted RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MALRD1Q5VYJ5 2156 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MEX3AA1L020 520 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SERPINE3A8MV23 424 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 KIAA1324LA8MWY0 1029 aaPredicted RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SSX5O60225 188 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MT-ND4P03905 459 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MELTFP08582 738 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 P2RX3P56373 397 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 EDDM3BP56851 147 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GNB2P62879 340 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PAX5Q02548 391 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ESCO2Q56NI9 601 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 KRBOX4Q5JUW0 171 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SLC35E4Q6ICL7 350 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PLET1Q6UQ28 207 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 Q6ZPA2 131 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GAPTQ8N292 157 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ENKURQ8TC29 256 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NUDCD2Q8WVJ2 157 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 DCTN5Q9BTE1 182 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 KIF25Q9UIL4 384 aa10.06□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CUBNO60494 3623 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 TRAV39A0A0B4J263 110 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MEIOCA2RUB1 952 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NAPSAO96009 420 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ERP29P30040 261 aaKnown RBP10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SLC6A1P30531 599 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 NPY4RP50391 375 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 GUCA2AQ02747 115 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 DYRK1AQ13627 763 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ARFRP1Q13795 201 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ARL6IP1Q15041 203 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 PNLIPRP3Q17RR3 467 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 BTN2A1Q7KYR7 527 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MRPL30Q8TCC3 161 aaKnown RBP10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 SMIM4Q8WVI0 70 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CMSS1Q9BQ75 279 aaKnown RBP10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 C19orf12Q9NSK7 152 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 CR1P17927 2039 aa10.05□□□□□ -0.8
TRAF3IP2-211ENST00000528599 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
TRAF3IP2-211ENST00000528599 LINC00854A0A1B0GVQ3 168 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms