RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 GDPD1Q8N9F7 314 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 BOLLQ8N9W6 283 aaKnown RBP6.16□□□□□ -1.42
CD44-228ENST00000528455 WFDC11Q8NEX6 87 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 OR4M1Q8NGD0 313 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 OR5T2Q8NGG2 359 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 ABHD1Q96SE0 405 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 TSC22D3Q99576 134 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 TMEM246Q9BRR3 403 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 NICN1Q9BSH3 213 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 FAAP24Q9BTP7 215 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 PECRQ9BY49 303 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 SHARPINQ9H0F6 387 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 KCNK15Q9H427 330 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 AUNIPQ9H7T9 357 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 ZMAT4Q9H898 229 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 EXTL2Q9UBQ6 330 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 MIOXQ9UGB7 285 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 ZNF222Q9UK12 451 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 MRPS7Q9Y2R9 242 aaKnown RBP6.16□□□□□ -1.42
CD44-228ENST00000528455 KCNK7Q9Y2U2 307 aa6.16□□□□□ -1.42
CD44-228ENST00000528455 TRAV24A0A0B4J272 114 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 FUOMA2VDF0 154 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 GABARAPH6UMI1 98 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 SLC33A1O00400 549 aaPredicted RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 SIGLEC5O15389 551 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 PPIHO43447 177 aaKnown RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 GSTZ1O43708 216 aaPredicted RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 ZNF737O75373 536 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 LY6HO94772 140 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 IGHV2-70P01814 119 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 IGHV4-39P01824 125 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 TK1P04183 234 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 WNT2P09544 360 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ZNF44P15621 663 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 GZMHP20718 246 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ERP29P30040 261 aaKnown RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 GABRA2P47869 451 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 TAS2R20P59543 309 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 COL10A1Q03692 680 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 SSBP1Q04837 148 aaKnown RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 IL18Q14116 193 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ZNF846Q147U1 533 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ZMYND11Q15326 602 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 MOGAT2Q3SYC2 334 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 FAM201AQ5SY85 155 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ATAD3CQ5T2N8 411 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 SLC35E4Q6ICL7 350 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 FAM131AQ6UXB0 335 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 LCNL1Q6ZST4 164 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 C6orf201Q7Z4U5 140 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 GAPTQ8N292 157 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 SUMF2Q8NBJ7 301 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 FCAMRQ8WWV6 532 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ST8SIA4Q92187 359 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 SEH1LQ96EE3 360 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 DPCDQ9BVM2 203 aaPredicted RBP6.15□□□□□ -1.42
CD44-228ENST00000528455 SCPEP1Q9HB40 452 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 AKIP1Q9NQ31 210 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 DCAF16Q9NXF7 216 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 OR14J1Q9UGF5 321 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 MAB21L2Q9Y586 359 aa6.15□□□□□ -1.42
CD44-228ENST00000528455 IGHV3OR15-7A0A075B7D8 119 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 TRBV6-6A0A0A6YYG2 114 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 A0A0G2JMP0 313 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 A0A0X1KG70 313 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 VWC2LB2RUY7 222 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 MFNGO00587 321 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 MGST3O14880 152 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 NDUFB3O43676 98 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 RBBP9O75884 186 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 GYPAP02724 150 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 MT-ND4P03905 459 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 GNB3P16520 340 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 CD80P33681 288 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 CBX5P45973 191 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
CD44-228ENST00000528455 NPY4RP50391 375 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 SLURP1P55000 103 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 GMFBP60983 142 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 IL13RA1P78552 427 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 PDCD1Q15116 288 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 Q5PR19 223 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 CLEC2AQ6UVW9 174 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 C17orf107Q6ZR85 190 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 OR8H2Q8N162 312 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 BATF2Q8N1L9 274 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 SPICQ8N5J4 248 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 ZNF565Q8N9K5 539 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 OR4M2Q8NGB6 313 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 GPX8Q8TED1 209 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 C10orf105Q8TEF2 133 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 C18orf12Q96KH6 178 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 CCL13Q99616 98 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 THAP7Q9BT49 309 aaPredicted RBP6.14□□□□□ -1.43
CD44-228ENST00000528455 WDR12Q9GZL7 423 aaKnown RBP6.14□□□□□ -1.43
CD44-228ENST00000528455 CHST6Q9GZX3 395 aa6.14□□□□□ -1.43
CD44-228ENST00000528455 ZMAT3Q9HA38 289 aaKnown RBP6.14□□□□□ -1.43
CD44-228ENST00000528455 PATZ1Q9HBE1 687 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms