RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 SSTR5P35346 364 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 LGALS4P56470 323 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 RSU1Q15404 277 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 SLC22A6Q4U2R8 563 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 Q6ZPA2 131 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 TRAPPC6BQ86SZ2 158 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 OSR2Q8N2R0 312 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 MRGPRDQ8TDS7 321 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 CFHR4Q92496 578 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 DPCDQ9BVM2 203 aaPredicted RBP8.54□□□□□ -1.04
CD44-227ENST00000528086 ANKRD60Q9BZ19 345 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 KCNK15Q9H427 330 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 CALYQ9NYX4 217 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 GLS2Q9UI32 602 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 MEIKINA0A087WXM9 373 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 BTBD17A6NE02 478 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 ZNF729A6NN14 1252 aaPredicted RBP8.53□□□□□ -1.04
CD44-227ENST00000528086 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 WIPF1O43516 503 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 MT-ND4P03905 459 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 MAS1P04201 325 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 CRHBPP24387 322 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 LOXL3P58215 753 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 TAS2R43P59537 309 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 PPP3R1P63098 170 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 QRFPP83859 136 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 HLA-DRB5Q30154 266 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 ACSM3Q53FZ2 586 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 GLIPR1L1Q6UWM5 242 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 GAPTQ8N292 157 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 UBALD1Q8TB05 177 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 METTL9Q9H1A3 318 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 BANF2Q9H503 90 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 CHCHD3Q9NX63 227 aaKnown RBP8.53□□□□□ -1.04
CD44-227ENST00000528086 DPM3Q9P2X0 92 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 PSG11Q9UQ72 335 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 PLXNB1O43157 2135 aa8.53□□□□□ -1.04
CD44-227ENST00000528086 A0A1W2PPE3 182 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 MYL12BO14950 172 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 MAGEB3O15480 346 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 OR7C1O76099 320 aaPredicted RBP8.52□□□□□ -1.05
CD44-227ENST00000528086 IL1AP01583 271 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 HTR1DP28221 377 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 GABRA5P31644 462 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 GLP1RP43220 463 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 MAP2K4P45985 399 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 SPHARQ15513 63 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 ZNF497Q6ZNH5 498 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 CDH26Q8IXH8 852 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 NDNFQ8TB73 568 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 Q96M66 194 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 WNT10AQ9GZT5 417 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 GAL3ST2Q9H3Q3 398 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 RANBP3Q9H6Z4 567 aaPredicted RBP8.52□□□□□ -1.05
CD44-227ENST00000528086 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 OR6C3Q9NZP0 311 aa8.52□□□□□ -1.05
CD44-227ENST00000528086 MRPS28Q9Y2Q9 187 aaKnown RBP8.52□□□□□ -1.05
CD44-227ENST00000528086 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 A0A0A6YYD4 124 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 A0A1W2PPI3 338 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A18PA6NE21 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A16PA6NEW6 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A20PA6NIJ5 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 SH2D7A6NKC9 451 aaPredicted RBP8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A9PA6NNJ1 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A12PA8MX19 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A5PA8MXJ8 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 J3QR06 171 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 SLC31A2O15432 143 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 UCHL1P09936 223 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A15PP0C7V4 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A13PP0C7W8 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A14PP0C7W9 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 FAM90A24PP0C7X0 464 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 RPS25P62851 125 aaKnown RBP8.51□□□□□ -1.05
CD44-227ENST00000528086 UNC119Q13432 240 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 TPBGQ13641 420 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 C1orf100Q5SVJ3 147 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 TPTE2P1Q5T6R2 138 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 LIPKQ5VXJ0 399 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 IZUMO2Q6UXV1 221 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 JAGN1Q8N5M9 183 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 KLHDC1Q8N7A1 406 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 C11orf44Q8N8P7 122 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 ZNF596Q8TC21 504 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 CCDC107Q8WV48 283 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 TMED9Q9BVK6 235 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 MND1Q9BWT6 205 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 ERGIC3Q9Y282 383 aa8.51□□□□□ -1.05
CD44-227ENST00000528086 SHISA3A0PJX4 238 aa8.5□□□□□ -1.05
CD44-227ENST00000528086 FUOMA2VDF0 154 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms