RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 BUB1B-PAK6H3BSN5 160 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 GABRPO00591 440 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 GPX5O75715 221 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 MYL12AP19105 171 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 C21orf33P30042 268 aaPredicted RBP8.39□□□□□ -1.07
CPSF1-203ENST00000527916 BRS3P32247 399 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 SOX2P48431 317 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 ARHGDIBP52566 201 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 BLCAPP62952 87 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 TMEM95Q3KNT9 176 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 KHDC1LQ5JSQ8 128 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 PRAMEF5Q5TYX0 476 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 OR2G6Q5TZ20 316 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 SLC16A12Q6ZSM3 486 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 SATL1Q86VE3 508 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 DHRSXQ8N5I4 330 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 OR10A7Q8NGE5 316 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 OR51A2Q8NGJ7 313 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 OR52N1Q8NH53 320 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 TNFAIP8L1Q8WVP5 186 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 SMIM19Q96E16 107 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 TMEM80Q96HE8 168 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 GPER1Q99527 375 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 PCDHB16Q9NRJ7 776 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 PAK1IP1Q9NWT1 392 aaPredicted RBP8.39□□□□□ -1.07
CPSF1-203ENST00000527916 CHCHD3Q9NX63 227 aaKnown RBP8.39□□□□□ -1.07
CPSF1-203ENST00000527916 TAS2R4Q9NYW5 299 aa8.39□□□□□ -1.07
CPSF1-203ENST00000527916 SIRT4Q9Y6E7 314 aaPredicted RBP8.39□□□□□ -1.07
CPSF1-203ENST00000527916 TRAV24A0A0B4J272 114 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 TRBV5-5A0A0J9YX44 114 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 LCE6AA0A183 80 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 NPIPB11E5RHQ5 1161 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 TOR1AO14656 332 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 ZNF780AO75290 641 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 IGFBP3P17936 291 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 ZNF93P35789 620 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 PPP3R1P63098 170 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 DGCR2P98153 550 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 ATXN7L3Q14CW9 347 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 RSU1Q15404 277 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 HLA-DRB5Q30154 266 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 YIF1BQ5BJH7 314 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 DMKNQ6E0U4 476 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 BAIAP2L2Q6UXY1 529 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 LINC00596Q86U02 117 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 ZNF485Q8NCK3 441 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 OR51D1Q8NGF3 324 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 OR9G1Q8NH87 305 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 GHSRQ92847 366 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 MYDGFQ969H8 173 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 AKR1E2Q96JD6 320 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 METTL9Q9H1A3 318 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 LIN7BQ9HAP6 207 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 ZNF286AQ9HBT8 521 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 PALMDQ9NP74 551 aa8.38□□□□□ -1.07
CPSF1-203ENST00000527916 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
CPSF1-203ENST00000527916 MEIKINA0A087WXM9 373 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 EFCAB10A6NFE3 127 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 RAMP3O60896 148 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 HTR3BO95264 441 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 LALBAP00709 142 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CSTBP04080 98 aaKnown RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CD1AP06126 327 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 JUNBP17275 347 aaPredicted RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 GZMHP20718 246 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 BDKRB2P30411 391 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 GDNFP39905 211 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 MNDAP41218 407 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 OR3A4PP47883 348 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 TAS2R43P59537 309 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 GPR176Q14439 515 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 LRRC36Q1X8D7 754 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 MPV17LQ2QL34 196 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 PAN3Q58A45 887 aaKnown RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 TCTEX1D4Q5JR98 221 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 TPTE2P1Q5T6R2 138 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 RSBN1Q5VWQ0 802 aaPredicted RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 Q6ZS46 218 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CDH26Q8IXH8 852 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 OSR2Q8N2R0 312 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 FBLIM1Q8WUP2 373 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CAPSLQ8WWF8 208 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CYGBQ8WWM9 190 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 GGHQ92820 318 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 S100A13Q99584 98 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 PPIL3Q9H2H8 161 aaKnown RBP8.37□□□□□ -1.07
CPSF1-203ENST00000527916 PLCXD1Q9NUJ7 323 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 CLEC2DQ9UHP7 191 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 KIF25Q9UIL4 384 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 ST3GAL6Q9Y274 331 aa8.37□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A18PA6NE21 464 aa8.36□□□□□ -1.07
CPSF1-203ENST00000527916 FAM90A16PA6NEW6 464 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms