RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 EMC9Q9Y3B6 208 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 CEP290O15078 2479 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 G3V4G9 280 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 K7EQS6 105 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 RAD51DO75771 328 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 TNFSF13O75888 250 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 CT62P0C5K7 136 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 AZU1P20160 251 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 ATP6V0CP27449 155 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 CDKN1AP38936 164 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 ECI1P42126 302 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 MGAT2Q10469 447 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 ZNF880Q6PDB4 577 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 MARCH3Q86UD3 253 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 FAM3CQ92520 227 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 ABHD6Q9BV23 337 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 TMEM38BQ9NVV0 291 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 CLN8Q9UBY8 286 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 DAPP1Q9UN19 280 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 HS3ST3A1Q9Y663 406 aa6.52□□□□□ -1.37
SOX6-208ENST00000527619 SNRNP200O75643 2136 aaKnown RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SHISA8B8ZZ34 492 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SOCS1O15524 211 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 RBFOX2O43251 390 aaKnown RBP eCLIP6.51□□□□□ -1.37
SOX6-208ENST00000527619 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 FGF17O60258 216 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 HBE1P02100 147 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 PEBP1P30086 187 aaKnown RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 ELLP55199 621 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 SUMO3P55854 103 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 ZNF266Q14584 549 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 GNMTQ14749 295 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ABHD17BQ5VST6 288 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 FAM90A2PQ658T7 463 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ZNF66Q6ZN08 573 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 VN1R4Q7Z5H5 301 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 D2HGDHQ8N465 521 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 OR52R1Q8NGF1 315 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 OR52N5Q8NH56 324 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 NT5CQ8TCD5 201 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 TMEM170AQ8WVE7 144 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 MOB3AQ96BX8 217 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 GPR84Q9NQS5 396 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ONECUT1Q9UBC0 465 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 PPIAL4AQ9Y536 164 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SCN2AQ99250 2005 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 PDE4DIPQ5VU43 2346 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 A0A0C4DFX4 3053 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 P2RY10O00398 339 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SLC33A1O00400 549 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 PDE6DO43924 150 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 KLF8O95600 359 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 CTSDP07339 412 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 CTSBP07858 339 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 IFI6P09912 130 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SELPP16109 830 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ZNF43P17038 809 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 TNFRSF1AP19438 455 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 DUSP1P28562 367 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 RAB11AP62491 216 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 CCL7P80098 99 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 CDK3Q00526 305 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ARFRP1Q13795 201 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 MMDQ15546 238 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 DEFB134Q4QY38 66 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 TCTEX1D4Q5JR98 221 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ADAMTSL4Q6UY14 1074 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 DEFB128Q7Z7B8 93 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 TGIF2LYQ8IUE0 185 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 ARHGEF39Q8N4T4 335 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 OR4N2Q8NGD1 307 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 HOXB13Q92826 284 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 DNAJA3Q96EY1 480 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 LMF2Q9BU23 707 aaKnown RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 ST6GALNAC5Q9BVH7 336 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 LYRM2Q9NU23 88 aaPredicted RBP6.51□□□□□ -1.37
SOX6-208ENST00000527619 COPS7AQ9UBW8 275 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 COL4A6Q14031 1691 aa6.51□□□□□ -1.37
SOX6-208ENST00000527619 GOLGA4Q13439 2230 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 MPDZO75970 2070 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SERINC4A6NH21 518 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZNF705FA8MVS1 300 aaPredicted RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 MPIG6BO95866 241 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZNF705DP0CH99 300 aaPredicted RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZNF705BP0CI00 300 aaPredicted RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 SFTPDP35247 375 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 P2RY2P41231 377 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 SNU13P55769 128 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 RPS15AP62244 130 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 EWSR1Q01844 656 aaKnown RBP eCLIP6.5□□□□□ -1.37
SOX6-208ENST00000527619 ZFP36L1Q07352 338 aaKnown RBP6.5□□□□□ -1.37
SOX6-208ENST00000527619 SRSF7Q16629 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
SOX6-208ENST00000527619 PRSS8Q16651 343 aa6.5□□□□□ -1.37
SOX6-208ENST00000527619 FIGLAQ6QHK4 219 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms