RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 C19orf25Q9UFG5 118 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-208ENST00000527323 NBEAQ8NFP9 2946 aa10.79□□□□□ -0.68
CAPN1-208ENST00000527323 TGIF2-C20orf24A0A0A6YYL0 155 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 HSD17B6O14756 317 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 ADAM20O43506 726 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 NDUFS6O75380 124 aaKnown RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 VAMP5O95183 116 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CDS2O95674 445 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 DEFA6Q01524 100 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 PEAR1Q5VY43 1037 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 C5orf24Q7Z6I8 188 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TBC1D26Q86UD7 250 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 OR1F12Q8NHA8 337 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM171Q8WVE6 324 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 SEMA5BQ9P283 1151 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 DKKL1Q9UK85 242 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 A6NJY4 79 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TNFSF11O14788 317 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 YKT6O15498 198 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 LMO1P25800 156 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 UCP3P55916 312 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 SRPXP78539 464 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 H3F3AP84243 136 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 FAM27BQ5VT28 67 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CMTM1Q8IZ96 169 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 FADS6Q8N9I5 356 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CPNE4Q96A23 557 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TVP23CQ96ET8 276 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 BTBD17A6NE02 478 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF729A6NN14 1252 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 NTN3O00634 580 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 PITX3O75364 302 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 SCAF4O95104 1147 aaKnown RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 SLC34A2O95436 690 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CD63P08962 238 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 FUT3P21217 361 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 MAS1LP35410 378 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 HIST1H3AP68431 136 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 NKX6-1P78426 367 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TRIP6Q15654 476 aaKnown RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 HIST2H3PS2Q5TEC6 136 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM123Q8N131 208 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 S100PBPQ96BU1 408 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 TMEM222Q9H0R3 208 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CRLF2Q9HC73 371 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 SLC7A10Q9NS82 523 aa10.78□□□□□ -0.68
CAPN1-208ENST00000527323 CHCHD2Q9Y6H1 151 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 COL5A1P20908 1838 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-208ENST00000527323 PROB1E7EW31 1015 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 B4GALT1P15291 398 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 RAB35Q15286 201 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 ELOBQ15370 118 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 FAM180AQ6UWF9 173 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 SPNS3Q6ZMD2 512 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 ZNF100Q8IYN0 542 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 IL22RA1Q8N6P7 574 aa10.77□□□□□ -0.68
CAPN1-208ENST00000527323 GNPNAT1Q96EK6 184 aaPredicted RBP10.77□□□□□ -0.68
CAPN1-208ENST00000527323 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 PPP1R2P9O14990 202 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 TRGC2P03986 189 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 KLK3P07288 261 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF32P17041 273 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 ERVFRD-1P60508 538 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 MRPS34P82930 218 aaKnown RBP10.77□□□□□ -0.69
CAPN1-208ENST00000527323 CDPF1Q6NVV7 123 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 SLC25A26Q70HW3 274 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 NEK7Q8TDX7 302 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 GLRX2Q9NS18 164 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 PARPBPQ9NWS1 579 aa10.77□□□□□ -0.69
CAPN1-208ENST00000527323 TNFSF12O43508 249 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 CHST1O43916 411 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 TK1P04183 234 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 DUSP3P51452 185 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 FUT6P51993 359 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 TLE4Q04727 773 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ZFP36L1Q07352 338 aaKnown RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ZNF154Q13106 437 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ICAM4Q14773 271 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM211Q6ICI0 200 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 LYRM2Q9NU23 88 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 TREM2Q9NZC2 230 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 A0A0J9YW62 118 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 HSPB6O14558 160 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 EPHA1P21709 976 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 C4orf17Q53FE4 359 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 GFI1BQ5VTD9 330 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 Q6ZSR3 168 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 SELENOHQ8IZQ5 122 aaKnown RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 ZIC4Q8N9L1 334 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 INTS12Q96CB8 462 aaKnown RBP10.76□□□□□ -0.69
CAPN1-208ENST00000527323 GPR61Q9BZJ8 451 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 GNG13Q9P2W3 67 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 C9orf172C9J069 976 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 H3BP45 60 aa10.76□□□□□ -0.69
CAPN1-208ENST00000527323 SYNGR3O43761 229 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms