RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 DEGS1O15121 323 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 PGA5P0DJD9 388 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 LYL1P12980 280 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 PGAM2P15259 253 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 SERPINF1P36955 418 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 ID4P47928 161 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 SRSF7Q16629 238 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 DHRS11Q6UWP2 260 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 RNF141Q8WVD5 230 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 LRRC46Q96FV0 321 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 NRIP2Q9BQI9 281 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 IFT22Q9H7X7 185 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 DUSP13Q9UII6 198 aa13.76□□□□□ -0.21
SNRNP35-204ENST00000527158 HS3ST1O14792 307 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 NXPH2O95156 264 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 ZNF44P15621 663 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 GLRXP35754 106 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 CASP6P55212 293 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 ERVK11-1P61568 191 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 CLRN3Q8NCR9 226 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 BPIFCQ8NFQ6 507 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 GTF3AQ92664 365 aaKnown RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 RND1Q92730 232 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 C14orf166Q9Y224 244 aaKnown RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 IGHV3-64DA0A0J9YX35 117 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 C1QTNF9BB2RNN3 333 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 C1QTNF9P0C862 333 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 FAM74A1Q5RGS3 127 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 FIP1L1Q6UN15 594 aaKnown RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 Q6ZR03 302 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 Q6ZS49 121 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 BAP18Q8IXM2 172 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 DCUN1D4Q92564 292 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 ARL11Q969Q4 196 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 VKORC1Q9BQB6 163 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 RTBDNQ9BSG5 229 aaPredicted RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 NKX6-2Q9C056 277 aaPredicted RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 JKAMPQ9P055 326 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 DNAJB11Q9UBS4 358 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
SNRNP35-204ENST00000527158 NAPSAO96009 420 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 PI3P19957 117 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 RPS23P62266 143 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 ATXN7L3Q14CW9 347 aaPredicted RBP13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 EIF5AL1Q6IS14 154 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 SVBPQ8N300 66 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 RDH5Q92781 318 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 PIEZO2Q9H5I5 2752 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 ATMQ13315 3056 aa13.74□□□□□ -0.21
SNRNP35-204ENST00000527158 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 A6NLC8 198 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 DNASE2O00115 360 aaPredicted RBP13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 SH2D1BO14796 132 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 SLC34A2O95436 690 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 GLRA1P23415 457 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 GLP1RP43220 463 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 DEFA5Q01523 94 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 SSX8Q7RTT4 187 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 POC1AQ8NBT0 407 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 Q9N2K0 584 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 PCDHB10Q9UN67 800 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 TRGV8A0A0C4DH27 118 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 ATG12O94817 140 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 IGHV3-13P01766 116 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 NKX6-1P78426 367 aaPredicted RBP13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 SPIN3Q5JUX0 258 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 TMEM230Q96A57 120 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 TLNRD1Q9H1K6 362 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 DECR2Q9NUI1 292 aa13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 MAP1BP46821 2468 aaKnown RBP13.73□□□□□ -0.21
SNRNP35-204ENST00000527158 KIR2DS1A0A191URI9 304 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 A0A1B0GWJ7 208 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 TMEM218A2RU14 115 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 TAAR5O14804 337 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 CD40P25942 277 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 FCGR2CP31995 323 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 CCKARP32238 428 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 KIR2DS4P43632 304 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 SELENOVP59797 346 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 KIR2DS1Q14954 304 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 ZNF146Q15072 292 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 BEX5Q5H9J7 111 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 Q6P435 159 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 VHLLQ6RSH7 139 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 TMEM108Q6UXF1 575 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 Q6ZPA2 131 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 C22orf34Q6ZV56 151 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 OR2Z1Q8NG97 314 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 AQP10Q96PS8 301 aa13.72□□□□□ -0.21
SNRNP35-204ENST00000527158 C3orf80F5H4A9 247 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms