RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 AP4M1O00189 453 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 IL1AP01583 271 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 TMEM225BP0DP42 221 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 DBTP11182 482 aaKnown RBP12.65□□□□□ -0.38
PTPRU-210ENST00000527027 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-210ENST00000527027 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
PTPRU-210ENST00000527027 RCN1Q15293 331 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 OR8J1Q8NGP2 316 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 RFESDQ8TAC1 157 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 RFKQ969G6 155 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 EME1Q96AY2 570 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 ASCL2Q99929 193 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 C9orf16Q9BUW7 83 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 GON7Q9BXV9 100 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 MYRFQ9Y2G1 1151 aa12.65□□□□□ -0.38
PTPRU-210ENST00000527027 H0YJX3 145 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 HSPB6O14558 160 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 POLR2IP36954 125 aaKnown RBP12.64□□□□□ -0.39
PTPRU-210ENST00000527027 ECI1P42126 302 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 GPR12P47775 334 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 MTNR1BP49286 362 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 GNG10P50151 68 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 CCR9P51686 369 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 LTC4SQ16873 150 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
PTPRU-210ENST00000527027 CXorf66Q5JRM2 361 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-210ENST00000527027 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 OR51A4Q8NGJ6 313 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 OR10AC1Q8NH08 325 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-210ENST00000527027 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 VCX3BQ9H321 246 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 ZCCHC4Q9H5U6 513 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
PTPRU-210ENST00000527027 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 NCBP2LA6PVI3 153 aaKnown RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 HTR1AP08908 422 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 ZP1P60852 638 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 ZNF816Q0VGE8 651 aaPredicted RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 FOXE3Q13461 319 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 GPR50Q13585 617 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 KISS1Q15726 138 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 DEFB136Q30KP8 78 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 CNIH3Q8TBE1 160 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 NR1H4Q96RI1 486 aaPredicted RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 CIB1Q99828 191 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 GABARAPL1Q9H0R8 117 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 VCXQ9H320 206 aa12.63□□□□□ -0.39
PTPRU-210ENST00000527027 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 SIRT4Q9Y6E7 314 aaPredicted RBP12.63□□□□□ -0.39
PTPRU-210ENST00000527027 DYNC2H1Q8NCM8 4307 aaKnown RBP12.62□□□□□ -0.39
PTPRU-210ENST00000527027 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 DAPL1A0PJW8 107 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 CCRL2O00421 344 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 HSD17B6O14756 317 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 SLC16A6O15403 523 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 MPZL2O60487 215 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 ELANEP08246 267 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 PAX5Q02548 391 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 RSBN1Q5VWQ0 802 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-210ENST00000527027 ELP2Q6IA86 826 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 Q8N6K4 173 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 OR2T10Q8NGZ9 312 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 ORC6Q9Y5N6 252 aa12.62□□□□□ -0.39
PTPRU-210ENST00000527027 IGHV3-72A0A0B4J1Y9 119 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 A0A1W2PPE3 182 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 HCKP08631 526 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 CHATP28329 748 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 SSTR5P35346 364 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 REG1BP48304 166 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 KCNJ3P48549 501 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 SERPINA12Q8IW75 414 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 IZUMO1Q8IYV9 350 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 PACRGLQ8N7B6 248 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 Q8N9W7 124 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 PLPPR1Q8TBJ4 325 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 PLSCR3Q9NRY6 295 aa12.61□□□□□ -0.39
PTPRU-210ENST00000527027 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
PTPRU-210ENST00000527027 J3QRE1 110 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 CASQ2O14958 399 aaPredicted RBP12.6□□□□□ -0.39
PTPRU-210ENST00000527027 SULT1B1O43704 296 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 ATP6V1G2O95670 118 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
PTPRU-210ENST00000527027 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 CASC10Q5T4H9 136 aa12.6□□□□□ -0.39
PTPRU-210ENST00000527027 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms