RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 UNQ9370/PRO34162Q6UXP9 181 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 ETV3LQ6ZN32 361 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 UTS2BQ765I0 119 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 OR8H2Q8N162 312 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 PRSS35Q8N3Z0 413 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 GPR148Q8TDV2 347 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 LEAP2Q969E1 77 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 RNF166Q96A37 237 aaPredicted RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 CPNE2Q96FN4 548 aaPredicted RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 RBM14Q96PK6 669 aaKnown RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 SPACA5Q96QH8 159 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 MGLLQ99685 303 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 MRPS26Q9BYN8 205 aaKnown RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 ISG20L2Q9H9L3 353 aaKnown RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 PLEKHA1Q9HB21 404 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 ZNF286AQ9HBT8 521 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 FRRS1LQ9P0K9 344 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 U3KQK5 164 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 TRAV39A0A0B4J263 110 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 TRBV5-5A0A0J9YX44 114 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 A0A1W2PPE3 182 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 SERPINE3A8MV23 424 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 LEUTXA8MZ59 168 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 CCRL2O00421 344 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 GPX5O75715 221 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OR2F2O95006 317 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 ZFPL1O95159 310 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 CELP19835 753 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 MPZP25189 248 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 AZGP1P25311 298 aaKnown RBP5.21□□□□□ -1.58
CD44-221ENST00000526000 ECI1P42126 302 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 KIR3DL2P43630 455 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OR3A1P47881 315 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 THBS3P49746 956 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 LUMP51884 338 aaPredicted RBP5.21□□□□□ -1.58
CD44-221ENST00000526000 FUT6P51993 359 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 NANOS3P60323 173 aaKnown RBP5.21□□□□□ -1.58
CD44-221ENST00000526000 RPL23AP62750 156 aaKnown RBP5.21□□□□□ -1.58
CD44-221ENST00000526000 DGCR2P98153 550 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 MEF2CQ06413 473 aaPredicted RBP5.21□□□□□ -1.58
CD44-221ENST00000526000 EGFEM1PQ0D2K5 195 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 IL24Q13007 206 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 DIAPH2-AS1Q14236 149 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 DEFB136Q30KP8 78 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 Q499Y3 187 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 TPTE2P1Q5T6R2 138 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OR2W3Q7Z3T1 314 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 CDH26Q8IXH8 852 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 FAM58AQ8N1B3 248 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OSR2Q8N2R0 312 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 PARP16Q8N5Y8 322 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 KLHL30-AS1Q8NEE0 82 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OR5D14Q8NGL3 314 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 RFESDQ8TAC1 157 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 GHSRQ92847 366 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 MUL1Q969V5 352 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 SPSB1Q96BD6 273 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 BORCS8Q96FH0 119 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 AKR1E2Q96JD6 320 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 PGLYRP3Q96LB9 341 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 OPALINQ96PE5 141 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 PKIBQ9C010 78 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 CHST5Q9GZS9 411 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 LIN7BQ9HAP6 207 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 NDUFB11Q9NX14 153 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 CKLFQ9UBR5 152 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 SCOCQ9UIL1 159 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 DHDHQ9UQ10 334 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 LINC00312Q9Y6C7 94 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 KIAA2026Q5HYC2 2103 aa5.21□□□□□ -1.58
CD44-221ENST00000526000 TRGV10A0A0A0MS01 117 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 IGHV3-72A0A0B4J1Y9 119 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 E9PI62 339 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 BUB1B-PAK6H3BSN5 160 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 HSPB6O14558 160 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 SH2D1BO14796 132 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 MGST3O14880 152 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 ARL6IP5O75915 188 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 DUS4LO95620 317 aaKnown RBP5.2□□□□□ -1.58
CD44-221ENST00000526000 LY86O95711 162 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OR2H2O95918 312 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 LALBAP00709 142 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 RBP4P02753 201 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 OCM2P0CE71 109 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 HSMCR30P0CW71 290 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 ZNF44P15621 663 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 ZNF20P17024 532 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 FSTP19883 344 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 PRKACBP22694 351 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 LMO1P25800 156 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 PSMB9P28065 219 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 MYCNOSP40205 109 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 MNDAP41218 407 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 MAP2K4P45985 399 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 PSMD7P51665 324 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 GTF2A1P52655 376 aaPredicted RBP5.2□□□□□ -1.58
CD44-221ENST00000526000 ATP1B3P54709 279 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 PRRX1P54821 245 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 MTCP1P56278 107 aa5.2□□□□□ -1.58
CD44-221ENST00000526000 P2RX3P56373 397 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms