RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 OSMP13725 252 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF20P17024 532 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 C21orf33P30042 268 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-211ENST00000523441 HTR1FP30939 366 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 PITPNAQ00169 270 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 CDK5Q00535 292 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 PDZK1IP1Q13113 114 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 HAGHQ16775 308 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 PAN3Q58A45 887 aaKnown RBP8.99□□□□□ -0.97
SDCBP-211ENST00000523441 Q6P435 159 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 CD300LDQ6UXZ3 194 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF565Q8N9K5 539 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 FGGYQ96C11 551 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ADAT3Q96EY9 351 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-211ENST00000523441 UBE2E2Q96LR5 201 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ELAC2Q9BQ52 826 aaKnown RBP8.99□□□□□ -0.97
SDCBP-211ENST00000523441 OSBPL10Q9BXB5 764 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 TEX12Q9BXU0 123 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ACTR3BQ9P1U1 418 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF107Q9UII5 783 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-211ENST00000523441 A3GALT2U3KPV4 340 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 TCRBV5S2A0A599 114 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 LINC01619G3V211 115 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 PRKYO43930 277 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 MOSP00540 346 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 IL1AP01583 271 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 ATF1P18846 271 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 CCL1P22362 96 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 ECSCRQ19T08 205 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 FAM98BQ52LJ0 330 aaKnown RBP8.98□□□□□ -0.97
SDCBP-211ENST00000523441 Q8N1Y9 231 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 Q8N6K4 173 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 EME1Q96AY2 570 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 TUBA4BQ9H853 241 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 SEBOXQ9HB31 216 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-211ENST00000523441 PLSCR3Q9NRY6 295 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 H2AFY2Q9P0M6 372 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-211ENST00000523441 TNCP24821 2201 aa8.98□□□□□ -0.97
SDCBP-211ENST00000523441 ATP6V0E1O15342 81 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 TMEM225BP0DP42 221 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 PRDX6P30041 224 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 RAB9AP51151 201 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF816Q0VGE8 651 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-211ENST00000523441 KIAA0141Q14154 515 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-211ENST00000523441 EBI3Q14213 229 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 ACSM6Q6P461 480 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 ANKRD13BQ86YJ7 626 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 IZUMO1Q8IYV9 350 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 PRSS35Q8N3Z0 413 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 OR13C9Q8NGT0 318 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 PLPPR1Q8TBJ4 325 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 CCDC107Q8WV48 283 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 DDB2Q92466 427 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 UTP4Q969X6 686 aaKnown RBP8.97□□□□□ -0.97
SDCBP-211ENST00000523441 OPALINQ96PE5 141 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 COMMD4Q9H0A8 199 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 ADGRL4Q9HBW9 690 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 KRT84Q9NSB2 600 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 C19orf73Q9NVV2 129 aa8.97□□□□□ -0.97
SDCBP-211ENST00000523441 SDCBPO00560 298 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-211ENST00000523441 KDM4BO94953 1096 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 CSN2P05814 226 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 OR8U9P0C7N5 309 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 OR5H8P0DN80 308 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 CGB3P0DN86 165 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 CGB7P0DN87 165 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 PRKACBP22694 351 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 KIR3DL2P43630 455 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 CDK5R1Q15078 307 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 MMDQ15546 238 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 ZSCAN26Q16670 478 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 LPCAT4Q643R3 524 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 Q6ZSR3 168 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 DHFR2Q86XF0 187 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 TCEANCQ8N8B7 351 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 DNAAF1Q8NEP3 725 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 OR51T1Q8NGJ9 327 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 OR10AC1Q8NH08 325 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 RTN4IP1Q8WWV3 396 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-211ENST00000523441 PP6455Q8WZ26 134 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 BARHL1Q9BZE3 327 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 OR51J1Q9H342 316 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 ZCCHC4Q9H5U6 513 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 MAGIXQ9H6Y5 334 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 ARL8BQ9NVJ2 186 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 FAM118AQ9NWS6 357 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 CLN6Q9NWW5 311 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 GNG8Q9UK08 70 aa8.96□□□□□ -0.98
SDCBP-211ENST00000523441 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 A0A1W2PN81 502 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 METTL15A6NJ78 407 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 C12orf77C9JDV5 145 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 SLC31A2O15432 143 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 IL3RAP26951 378 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 CNTFRP26992 372 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 BLVRBP30043 206 aaPredicted RBP8.95□□□□□ -0.98
SDCBP-211ENST00000523441 CHRNA7P36544 502 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 TP53I3Q53FA7 332 aa8.95□□□□□ -0.98
SDCBP-211ENST00000523441 FAM71E2Q8N5Q1 922 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms