RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 VSIG10L2P0DP72 767 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 CBR1P16152 277 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 ENDOGQ14249 297 aaKnown RBP11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 HMGN3Q15651 99 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 SEZ6L2Q6UXD5 910 aa11.33□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A087WV48 116 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 BTBD17A6NE02 478 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPL36A-HNRNPH2H7BZ11 118 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 NPIPB7O75200 414 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 OPN1MWP04001 364 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 FCGR3AP08637 254 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CT45A6P0DMU7 189 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CT45A5P0DMU8 189 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CT45A7P0DMV0 189 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 UCNP55089 124 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CT45A1Q5HYN5 189 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CT45A3Q8NHU0 189 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 RXFP4Q8TDU9 374 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 TICRRQ7Z2Z1 1910 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRF1P14222 555 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 KRTCAP3Q53RY4 240 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 ADAMTS17Q8TE56 1095 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 MED9Q9NWA0 146 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 PHF3Q92576 2039 aaKnown RBP11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 TRAV38-1A0A0B4J264 116 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A1W2PRD5 423 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A1W2PRF3 423 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A1W2PRM7 423 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 CFDP00746 253 aaPredicted RBP11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 HLA-DRB3P79483 266 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF787Q6DD87 383 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 C19orf48Q6RUI8 117 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM54Q969K7 222 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 KPTNQ9Y664 436 aa11.32□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 CST4P01036 141 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 FAM3AP98173 230 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 TRAT1Q6PIZ9 186 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 DEPPQ9NTK1 212 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 FGF7P21781 194 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPL7L1Q6DKI1 246 aaKnown RBP11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF251Q9BRH9 671 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 TRAF4Q9BUZ4 470 aaPredicted RBP11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 GHITMQ9H3K2 345 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 TUBAL3A6NHL2 446 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 HRASP01112 189 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 CEACAM1P13688 526 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 COX5AP20674 150 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 TNFSF10P50591 281 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 LAMTOR1Q6IAA8 161 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 MITD1Q8WV92 249 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 MRPS11P82912 194 aaKnown RBP11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 IGSF11Q5DX21 431 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 FER1L5A0AVI2 2057 aa11.31□□□□□ -0.6
PCDHGB1-201ENST00000523390 OOEPA6NGQ2 149 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRR32B1ATL7 298 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR7C2O60412 319 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 FGF12P61328 243 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM88Q6PEY1 159 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 MDFIC2A0A1B0GVS7 189 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPS2P15880 293 aaKnown RBP11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 VDAC1P21796 283 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM33P57088 247 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 S100A12P80511 92 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 RPEQ96AT9 228 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 MED13LQ71F56 2210 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A0G2JK05 382 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLC25A6P12236 298 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB7AP51149 207 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR2W1Q9Y3N9 320 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM210A6NLX4 147 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR4F5Q8NH21 305 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR4F4Q96R69 305 aa11.3□□□□□ -0.6
PCDHGB1-201ENST00000523390 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms