RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 FAM131AQ6UXB0 335 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 PID1Q7Z2X4 250 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 CMTM8Q8IZV2 173 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 DNAAF3Q8N9W5 541 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 OR11H7Q8NGC8 314 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 OR8D4Q8NGM9 314 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 SLC25A46Q96AG3 418 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 MGLLQ99685 303 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 SAV1Q9H4B6 383 aaPredicted RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 TMEM9BQ9NQ34 198 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 C1orf109Q9NX04 203 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 NDUFB11Q9NX14 153 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 ZNF226Q9NYT6 803 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 VAPAQ9P0L0 249 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 NDRG2Q9UN36 371 aaKnown RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 BAIAP2Q9UQB8 552 aa5.09□□□□□ -1.59
LSM1-202ENST00000520286 RCL1Q9Y2P8 373 aaKnown RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 SAMHD1Q9Y3Z3 626 aaKnown RBP5.09□□□□□ -1.59
LSM1-202ENST00000520286 DENND4AQ7Z401 1863 aa5.09□□□□□ -1.6
LSM1-202ENST00000520286 DMDP11532 3685 aa5.09□□□□□ -1.6
LSM1-202ENST00000520286 SHROOM3Q8TF72 1996 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 LCTP09848 1927 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 MEIKINA0A087WXM9 373 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 FABP12A6NFH5 140 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SERPINE3A8MV23 424 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 AIPO00170 330 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SNAPC5O75971 98 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 HBE1P02100 147 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ARG1P05089 322 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ADRA2AP08913 450 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 NMBP08949 121 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 LINC00032P0C843 101 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SULT1A3P0DMM9 295 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SULT1A4P0DMN0 295 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SLC6A1P30531 599 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CD52P31358 61 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 RND2P52198 227 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CARD18P57730 90 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 PPP3R1P63098 170 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 TTLL9Q3SXZ7 439 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 NKAIN1Q4KMZ8 207 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ATP6AP1LQ52LC2 224 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 TEX43Q6ZNM6 134 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 NKAIN4Q8IVV8 208 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 INO80EQ8NBZ0 244 aaPredicted RBP5.08□□□□□ -1.6
LSM1-202ENST00000520286 OR52N1Q8NH53 320 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CDC26Q8NHZ8 85 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ARL5BQ96KC2 179 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 NRTNQ99748 197 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ZNF251Q9BRH9 671 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 TMEM175Q9BSA9 504 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ZNF436Q9C0F3 470 aaPredicted RBP5.08□□□□□ -1.6
LSM1-202ENST00000520286 TMEM38AQ9H6F2 299 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 ABCB9Q9NP78 766 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 SDHAF3Q9NRP4 125 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 BABAM2Q9NXR7 383 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CTSFQ9UBX1 484 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CYB5R1Q9UHQ9 305 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 TP53TG5Q9Y2B4 290 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 CFAP47Q6ZTR5 3102 aa5.08□□□□□ -1.6
LSM1-202ENST00000520286 TRAV19A0A0A6YYK7 116 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 PSIP1O75475 530 aaKnown RBP5.07□□□□□ -1.6
LSM1-202ENST00000520286 SERPINA1P01009 418 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 BGLAPP02818 100 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 CRYGCP07315 174 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 TSPAN19P0C672 248 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 RCC1P18754 421 aaPredicted RBP5.07□□□□□ -1.6
LSM1-202ENST00000520286 MAS1LP35410 378 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 TGM4P49221 684 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 RPS15AP62244 130 aaKnown RBP5.07□□□□□ -1.6
LSM1-202ENST00000520286 ST3GAL4Q11206 333 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 GOLGA7BQ2TAP0 167 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 SPIN4Q56A73 249 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 PYDC2Q56P42 97 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 HACD4Q5VWC8 232 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 SYPL2Q5VXT5 272 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 TRIQKQ629K1 86 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 ALKAL1Q6UXT8 129 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 ZNF493Q6ZR52 646 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 FAM122BQ7Z309 247 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 UNC93AQ86WB7 457 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 STPG2Q8N412 459 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 ZFP41Q8N8Y5 198 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 C12orf29Q8N999 325 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 OR10A6Q8NH74 314 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 CLHC1Q8NHS4 586 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 UBA3Q8TBC4 463 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 DNAJB3Q8WWF6 145 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 NTAN1Q96AB6 310 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 DIRAS2Q96HU8 199 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 PPP1R2P1Q96PQ5 205 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 MICU1Q9BPX6 476 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 TBL1YQ9BQ87 522 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 BCL2L14Q9BZR8 327 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 MED28Q9H204 178 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 OR2AG1Q9H205 316 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 FBXO44Q9H4M3 255 aa5.07□□□□□ -1.6
LSM1-202ENST00000520286 BIN3Q9NQY0 253 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms