RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PARPBPQ9NWS1 579 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 SLC7A11Q9UPY5 501 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 AMDHD2Q9Y303 409 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 NSG2Q9Y328 171 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 STARD10Q9Y365 291 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 LOXL2Q9Y4K0 774 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 FREM1Q5H8C1 2179 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 TRIOO75962 3097 aa4.33□□□□□ -1.72
SDC2-204ENST00000519914 PIGBOS1A0A0B4J2F0 54 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 A0A1B0GW64 132 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 PINLYPA6NC86 204 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 CCDC85CA6NKD9 419 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 FAM157AC9JC47 383 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 SDCBPO00560 298 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 GPR137BO60478 399 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 NEURL1O76050 574 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 DIRAS3O95661 229 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 NAPSAO96009 420 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 ACTL6AO96019 429 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 F10P00742 488 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 IFNA21P01568 189 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 ZNF728P0DKX0 622 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 MMP9P14780 707 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 B4GALT1P15291 398 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TMEM11P17152 192 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TCN2P20062 427 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 FUT3P21217 361 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 GABRR1P24046 479 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 S100A2P29034 98 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 RPL12P30050 165 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 P2RY1P47900 373 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 CLDN18P56856 261 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 FGF12P61328 243 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 RPL11P62913 178 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 DEFA5Q01523 94 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 ATXN7L3Q14CW9 347 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 CDSNQ15517 529 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 HMGN3Q15651 99 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TAF9Q16594 264 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 HAGHQ16775 308 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 MPV17LQ2QL34 196 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 IAH1Q2TAA2 248 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 CR1LQ2VPA4 569 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TMEM95Q3KNT9 176 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 OR2B11Q5JQS5 317 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 Q6ZPA2 131 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 LGI3Q8N145 548 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 CCDC71LQ8N9Z2 235 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 BHLHE23Q8NDY6 225 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 BEND2Q8NDZ0 799 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 OR2M7Q8NG81 312 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 OR51F2Q8NH61 342 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 OR2AE1Q8NHA4 323 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 NPRL2Q8WTW4 380 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 RTN4IP1Q8WWV3 396 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 ROBO4Q8WZ75 1007 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 IL22RA2Q969J5 263 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 MARS2Q96GW9 593 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 TMEM56Q96MV1 263 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 NOL4LQ96MY1 436 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 IP6K3Q96PC2 410 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 ALKBH3Q96Q83 286 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 TSNAXQ99598 290 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 HDHD3Q9BSH5 251 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 FAAP24Q9BTP7 215 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 STRADBQ9C0K7 418 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 MS4A7Q9GZW8 240 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 RIMS4Q9H426 269 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 METTL8Q9H825 291 aaKnown RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 ZNF701Q9NV72 531 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 P4HTMQ9NXG6 502 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 ZNF629Q9UEG4 869 aaPredicted RBP4.32□□□□□ -1.72
SDC2-204ENST00000519914 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 GAB2Q9UQC2 676 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TMED3Q9Y3Q3 217 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 TMEM56-RWDD3S4R434 201 aa4.32□□□□□ -1.72
SDC2-204ENST00000519914 CUL9Q8IWT3 2517 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 TRIOBPQ9H2D6 2365 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 FAM230AA0A1W2PPH8 454 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 NPIPB11E5RHQ5 1161 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 G3V3Y1 287 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 K7EPK0 472 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 OVOL3O00110 214 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 ITGB1BP1O14713 200 aa4.31□□□□□ -1.72
SDC2-204ENST00000519914 GEMIN2O14893 280 aaKnown RBP4.31□□□□□ -1.72
SDC2-204ENST00000519914 SPRY1O43609 319 aaPredicted RBP4.31□□□□□ -1.72
SDC2-204ENST00000519914 ANGPTL7O43827 346 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms