RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 LCN2P80188 198 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 IL18Q14116 193 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 ZNF260Q3ZCT1 412 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 C6orf183Q5T699 404 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 BTN2A1Q7KYR7 527 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 FAM185AQ8N0U4 392 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 LINC01356Q8N9X3 169 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 COQ2Q96H96 371 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 DMRTB1Q96MA1 342 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 AUNIPQ9H7T9 357 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 ZMAT3Q9HA38 289 aaKnown RBP11.71□□□□□ -0.53
SDC2-203ENST00000519587 SCPEP1Q9HB40 452 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 ING3Q9NXR8 418 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 KIF25Q9UIL4 384 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 RPUSD1Q9UJJ7 312 aaKnown RBP11.71□□□□□ -0.53
SDC2-203ENST00000519587 POLR3KQ9Y2Y1 108 aaPredicted RBP11.71□□□□□ -0.53
SDC2-203ENST00000519587 LINC00312Q9Y6C7 94 aa11.71□□□□□ -0.53
SDC2-203ENST00000519587 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 FABP12A6NFH5 140 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
SDC2-203ENST00000519587 LIPFP07098 398 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 MSMBP08118 114 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 DTYMKP23919 212 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.544e-12■□□□□ 11.3
SDC2-203ENST00000519587 PRSS3P35030 304 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 CBX5P45973 191 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 GLIPR1P48060 266 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
SDC2-203ENST00000519587 TMEM249Q2WGJ8 235 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 PYHIN1Q6K0P9 492 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 FAM131AQ6UXB0 335 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 ZNF554Q86TJ5 538 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 SNX29P2Q8IUI4 249 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 GAPTQ8N292 157 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 C8orf46Q8TAG6 207 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 DYRK2Q92630 601 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 C19orf12Q9NSK7 152 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 KCNIP1Q9NZI2 227 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 TRAPPC2LQ9UL33 140 aa11.7□□□□□ -0.54
SDC2-203ENST00000519587 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
SDC2-203ENST00000519587 TRBV6-6A0A0A6YYG2 114 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 hCG_1809904A0A1W2PP81 198 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 A0A1W2PPE2 198 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 A0A1W2PR64 198 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 A0A1W2PRV1 198 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 NAPSAO96009 420 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 MT-ND4P03905 459 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 LPLP06858 475 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 MELTFP08582 738 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 GATA3P23771 443 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 GLCCI1Q86VQ1 547 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 TPRX1Q8N7U7 411 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 DTX3Q8N9I9 347 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 ZNF565Q8N9K5 539 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 SETD6Q8TBK2 473 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 COX4I2Q96KJ9 171 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 IFT46Q9NQC8 304 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 KCNK7Q9Y2U2 307 aa11.69□□□□□ -0.54
SDC2-203ENST00000519587 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
SDC2-203ENST00000519587 A0A0G2JMP0 313 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 A0A0X1KG70 313 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 C22orf46C9J442 243 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 SULT1C2O00338 296 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 FCN3O75636 299 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 PPIAL4GP0DN37 164 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 IGHV4-31P0DP07 118 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 ETV6P41212 452 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 OLFML2AQ68BL7 652 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 CYB5R2Q6BCY4 276 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 KIR3DL3Q8N743 410 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 MAPK1IP1LQ8NDC0 245 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 OR4M2Q8NGB6 313 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
SDC2-203ENST00000519587 S100ZQ8WXG8 99 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 ZNF714Q96N38 554 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 TAS2R3Q9NYW6 316 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 ONECUT1Q9UBC0 465 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 WNK2Q9Y3S1 2297 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 KIAA2026Q5HYC2 2103 aa11.68□□□□□ -0.54
SDC2-203ENST00000519587 KIR2DS1A0A191URI9 304 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 ZNF729A6NN14 1252 aaPredicted RBP11.67□□□□□ -0.54
SDC2-203ENST00000519587 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
SDC2-203ENST00000519587 SPINT2O43291 252 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 RBP4P02753 201 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 FCGR3AP08637 254 aa11.67□□□□□ -0.54
SDC2-203ENST00000519587 CD99P14209 185 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms