RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	ZFAND2A	Q8N6M9	145 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	GATD1	Q8NB37	220 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	CENPN	Q96H22	339 aa	Predicted RBP	0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	SLC19A3	Q9BZV2	496 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	SLC25A31	Q9H0C2	315 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	TDRD3	Q9H7E2	651 aa	Known RBP	0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	AP3M1	Q9Y2T2	418 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	RTTN	Q86VV8	2226 aa		0.33	□□□□□ -2.36
PCM1-208	ENST00000518877	CUL9	Q8IWT3	2517 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	PLCH2	O75038	1416 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	ANKRD20A5P	A0PJZ0	165 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CASQ2	O14958	399 aa	Predicted RBP	0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	TCAP	O15273	167 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	TCF21	O43680	179 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	GMDS	O60547	372 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CA2	P00918	260 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CD8A	P01732	235 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	PEBP1	P30086	187 aa	Known RBP	0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	GPR4	P46093	362 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CTAG1A	P78358	180 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	DEFA6	Q01524	100 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	PIP5KL1	Q5T9C9	394 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	SDIM1	Q6ZPB5	146 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	FAM43B	Q6ZT52	329 aa	Predicted RBP	0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	OTUD6A	Q7L8S5	288 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	SSX7	Q7RTT5	188 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CYP4Z1	Q86W10	505 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	FBXO36	Q8NEA4	188 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	CD200R1	Q8TD46	325 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	TMIGD2	Q96BF3	282 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	GPR22	Q99680	433 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	IL22	Q9GZX6	179 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	VCX3A	Q9NNX9	186 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	ACOT13	Q9NPJ3	140 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	TBL2	Q9Y4P3	447 aa	Known RBP	0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	MTCH2	Q9Y6C9	303 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	NRCAM	Q92823	1304 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	FREM1	Q5H8C1	2179 aa		0.32	□□□□□ -2.36
PCM1-208	ENST00000518877	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	PTPRK	Q15262	1439 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	KIAA2026	Q5HYC2	2103 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877		A0A1W2PRG6	482 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	PGP	A6NDG6	321 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	SEC14L6	B5MCN3	397 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	ZNF593	O00488	134 aa	Predicted RBP	0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	PLPP3	O14495	311 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	GPX1	P07203	203 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	ZNF3	P17036	446 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	ELK4	P28324	431 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	TAS2R60	P59551	318 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	TSPAN31	Q12999	210 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	GUSBP1	Q15486	140 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	TIMM23B	Q5SRD1	257 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	CLEC20A	Q6ZU45	233 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	FAM58A	Q8N1B3	248 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	KIAA1143	Q96AT1	154 aa	Predicted RBP	0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	POTEKP	Q9BYX7	375 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	NEURL4	Q96JN8	1562 aa		0.31	□□□□□ -2.36
PCM1-208	ENST00000518877	KMT2D	O14686	5537 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	ARAP3	Q8WWN8	1544 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	IGLV3-9	A0A075B6K5	115 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	TRGV2	A0A075B6R0	118 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	IGHV3OR15-7	A0A075B7D8	119 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	IGHV2-26	A0A0B4J1V2	119 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877		A0A1B0GTQ1	180 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877		A0A1B0GVG6	124 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	ARGFX	A6NJG6	315 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877		A8MWP6	167 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877		F8VP50	259 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	RALB	P11234	206 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	ALOX5AP	P20292	161 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	SPAM1	P38567	509 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	GCLM	P48507	274 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	BCAP31	P51572	246 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	XK	P51811	444 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	RAB25	P57735	213 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	ZNF117	Q03924	483 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	C2orf80	Q0P641	193 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	WDR43	Q15061	677 aa	Known RBP eCLIP	0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	GOLGA7B	Q2TAP0	167 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	VN1R4	Q7Z5H5	301 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	SELENOH	Q8IZQ5	122 aa	Known RBP	0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	OR4A15	Q8NGL6	344 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	ERMN	Q8TAM6	284 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	C10orf105	Q8TEF2	133 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	TOP1MT	Q969P6	601 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	FAM131C	Q96AQ9	280 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	BIRC8	Q96P09	236 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877		Q9BRP9	147 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	UTP23	Q9BRU9	249 aa	Known RBP	0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	TIMM21	Q9BVV7	248 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	TAPBPL	Q9BX59	468 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	SPZ1	Q9BXG8	430 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	NXF2	Q9GZY0	626 aa	Known RBP	0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	FBXL15	Q9H469	300 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	CLSTN2	Q9H4D0	955 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	PRO2289	Q9P1D8	64 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	POMP	Q9Y244	141 aa		0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	BAZ2B	Q9UIF8	2168 aa	Known RBP	0.3	□□□□□ -2.36
PCM1-208	ENST00000518877	WDR19	Q8NEZ3	1342 aa		0.3	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms