RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 LIMS3P0CW19 117 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 LIMS4P0CW20 117 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 RAB40BQ12829 278 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 RSBN1Q5VWQ0 802 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 ZNF529Q6P280 563 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 UBALD1Q8TB05 177 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 NOL4LQ96MY1 436 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 MYCBPQ99417 103 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 C9orf16Q9BUW7 83 aa13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-206ENST00000517980 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 MPZL2O60487 215 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 SSTR5P35346 364 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 ETV1P50549 477 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 KRTAP10-11P60412 298 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 DEFB121Q5J5C9 76 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 FAM53AQ6NSI3 398 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 THNSL2Q86YJ6 484 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 JAM3Q9BX67 310 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 ST3GAL6Q9Y274 331 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 RPL36Q9Y3U8 105 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 SIRT4Q9Y6E7 314 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
CTNNA1-206ENST00000517980 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 NPIPB11E5RHQ5 1161 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 K7EIL1 84 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 IL1AP01583 271 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 TMEM11P17152 192 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 HOXD3P31249 432 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 MRPL28Q13084 256 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 IL13RA2Q14627 380 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 OR2G6Q5TZ20 316 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 ASCL4Q6XD76 172 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 OSR2Q8N2R0 312 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 CCDC107Q8WV48 283 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 DPCDQ9BVM2 203 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 NCOR1P1Q9H4R4 102 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 AMMECR1Q9Y4X0 333 aaPredicted RBP13.71□□□□□ -0.21
CTNNA1-206ENST00000517980 IGHV3-72A0A0B4J1Y9 119 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 A0A1W2PPI3 338 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 WI2-2373I1.2A0A1W2PRP0 233 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 LINC01548A6NM66 108 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 M0QZK8 103 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 REG1BP48304 166 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 SLC35A2P78381 396 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 MADCAM1Q13477 382 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 Q8NFD4 153 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 OR13C5Q8NGS8 318 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 OR10X1Q8NGY0 326 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 HAVCR2Q8TDQ0 301 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 GPR148Q8TDV2 347 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 LINC00574Q9H8X3 128 aa13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-206ENST00000517980 A0A1W2PP11 408 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 GEMIN2O14893 280 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 WBP4O75554 376 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 BAG2O95816 211 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 SERPINA2P20848 420 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 RPL22L1Q6P5R6 122 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 MOB3BQ86TA1 216 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 OR52N1Q8NH53 320 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 METTL9Q9H1A3 318 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 PCDHB16Q9NRJ7 776 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 CLEC2DQ9UHP7 191 aa13.69□□□□□ -0.22
CTNNA1-206ENST00000517980 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 SERPINE3A8MV23 424 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 CLIC3O95833 236 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 CSTBP04080 98 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 CD2P06729 351 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 ZNF93P35789 620 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 RAB7AP51149 207 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 ATAD3CQ5T2N8 411 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 DDI2Q5TDH0 399 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 ETV3LQ6ZN32 361 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 MRPL41Q8IXM3 137 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 PQLC1Q8N2U9 271 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 LINC00482Q8N8I6 264 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 CPNE2Q96FN4 548 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 RCC1LQ96I51 464 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-206ENST00000517980 OGG1O15527 345 aa13.67□□□□□ -0.22
CTNNA1-206ENST00000517980 LALBAP00709 142 aa13.67□□□□□ -0.22
CTNNA1-206ENST00000517980 GZMHP20718 246 aa13.67□□□□□ -0.22
CTNNA1-206ENST00000517980 KCNJ3P48549 501 aa13.67□□□□□ -0.22
CTNNA1-206ENST00000517980 RBM11P57052 281 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-206ENST00000517980 C8orf86Q6ZUL3 223 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms