RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 FAM122BQ7Z309 247 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CMC1Q7Z7K0 106 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 NAA40Q86UY6 237 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TMEM139Q8IV31 216 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CTAGE3PQ8IX95 158 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 PPIL6Q8IXY8 311 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 PDIK1LQ8N165 341 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CLEC4FQ8N1N0 589 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TRIML2Q8N7C3 387 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 LSMEM1Q8N8F7 131 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 ZNF565Q8N9K5 539 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 GRPEL2Q8TAA5 225 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 FAM81AQ8TBF8 368 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 MIPOL1Q8TD10 442 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 LRRC8CQ8TDW0 803 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 EMG1Q92979 244 aaKnown RBP1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 LEAP2Q969E1 77 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 SLC35B4Q969S0 331 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 REEP6Q96HR9 211 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 PBKQ96KB5 322 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 SNX22Q96L94 193 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 PHB2Q99623 299 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 GPR22Q99680 433 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CPNE1Q99829 537 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 COPS4Q9BT78 406 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 DUSP26Q9BV47 211 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 JAM3Q9BX67 310 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TM2D1Q9BX74 207 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TMEM120AQ9BXJ8 343 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CDIP1Q9H305 208 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 C5orf66Q9H5L9 145 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 NHEJ1Q9H9Q4 299 aaPredicted RBP1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 HES4Q9HCC6 221 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TNFRSF12AQ9NP84 129 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 SPAG4Q9NPE6 437 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 AIG1Q9NVV5 245 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 C1orf109Q9NX04 203 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CLEC5AQ9NY25 188 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TVP23BQ9NYZ1 205 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 MSRB1Q9NZV6 116 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 MRPL27Q9P0M9 148 aaKnown RBP1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 DKK2Q9UBU2 259 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 SAMD4AQ9UPU9 718 aaKnown RBP1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 CORO2BQ9UQ03 480 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 TMED5Q9Y3A6 229 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 UFC1Q9Y3C8 167 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 MRPS16Q9Y3D3 137 aaKnown RBP1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 RHBDD3Q9Y3P4 386 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 JRKLQ9Y4A0 524 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 RFNGQ9Y644 331 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 X6R8D5 127 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 DSCAML1Q8TD84 2053 aa1.28□□□□□ -2.2
RNU6-548P-201ENST00000517083 MUC17Q685J3 4493 aa1.28□□□□□ -2.21
RNU6-548P-201ENST00000517083 IGKV3-7A0A075B6H7 116 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 TMEM213A2RRL7 107 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 FAM231BA6NCW3 169 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 RBFOX3A6NFN3 312 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SMIM9A6NGZ8 99 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 OR2T8A6NH00 312 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 NPIPB13A6NJU9 1138 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 FAM223BA6NKX1 122 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 OR5B21A6NL26 309 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ZNF729A6NN14 1252 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 LINC00473A8K010 186 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 A8MWP6 167 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ZNF736B4DX44 427 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 C5orf58C9J3I9 102 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 NPIPB4C9JG80 1138 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 PPP5D1E7EU14 171 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 H7C1C5 153 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 DNASE2O00115 360 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 HMGN4O00479 90 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ISLRO14498 428 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SLC22A1O15245 554 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 MPPED1O15442 326 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SLC16A7O60669 478 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 TPST2O60704 377 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 KHDRBS3O75525 346 aaKnown RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 BANF1O75531 89 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 LYPLA1O75608 230 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 KLHL2O95198 593 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 OR2C1O95371 312 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 WISP3O95389 354 aaPredicted RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SOX14O95416 240 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 HLA-AP01891 365 aaKnown RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 IL6P05231 212 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ATP5G1P05496 136 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 GSTP1P09211 210 aaKnown RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SLC2A1P11166 492 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SPRR2EP22531 72 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 EVI2AP22794 236 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 HSD11B1P28845 292 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ERP29P30040 261 aaKnown RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SPRR2BP35325 72 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 SPRR2AP35326 72 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 ANP32AP39687 249 aaKnown RBP1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 AQP2P41181 271 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 GLP1RP43220 463 aa1.27□□□□□ -2.21
RNU6-548P-201ENST00000517083 HAAOP46952 286 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms