RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ILKAPQ9H0C8 392 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 ROPN1Q9HAT0 212 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 PRMT8Q9NR22 394 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-542P-201ENST00000516405 SIPA1L1O43166 1804 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 GPR31O00270 319 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 UPK1AO00322 258 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 MAGEB3O15480 346 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 ERLIN1O75477 346 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 FLOT1O75955 427 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 SMC2O95347 1197 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 SERPINA5P05154 406 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 IGHV3-30-3P0DP02 117 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 MYL9P24844 172 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 PFN2P35080 140 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 ACTR1AP61163 376 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 MMDQ15546 238 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 CFAP58Q5T655 872 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 REEP3Q6NUK4 255 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 FAM71CQ8NEG0 241 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR10W1Q8NGF6 305 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR10AC1Q8NH08 325 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR5B3Q8NH48 314 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 KCTD4Q8WVF5 259 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 FAM19A4Q96LR4 140 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 CHST6Q9GZX3 395 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 MRPL27Q9P0M9 148 aaKnown RBP-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 TRIM10Q9UDY6 481 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 PLCE1Q9P212 2302 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 BCL9O00512 1426 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 MAST2Q6P0Q8 1798 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 REREQ9P2R6 1566 aa-2.61□□□□□ -2.83
RNU6-542P-201ENST00000516405 IGHV1-45A0A0A0MS14 117 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 TRBV6-8A0A0A6YYG3 113 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC5A10A0PJK1 596 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 IRGMA1A4Y4 181 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 BHLHE40O14503 412 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 TOR1AO14656 332 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 RAD51CO43502 376 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC25A16P16260 332 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 BRS3P32247 399 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 GPR1P46091 355 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 KIAA1024LP59773 190 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 HADHQ16836 314 aaKnown RBP-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 TMEM41BQ5BJD5 291 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 STEAP4Q687X5 459 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 RASL11AQ6T310 242 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 WDR88Q6ZMY6 472 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 TAF8Q7Z7C8 310 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 LINC00596Q86U02 117 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 PSTKQ8IV42 348 aaKnown RBP-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR51L1Q8NGJ5 315 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR1L8Q8NGR8 309 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 PIBF1Q8WXW3 757 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 SPACA5Q96QH8 159 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 MGLLQ99685 303 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 NAPGQ99747 312 aaPredicted RBP-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 MIEN1Q9BRT3 115 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 MRPL20Q9BYC9 149 aaKnown RBP-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 ARV1Q9H2C2 271 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 METTL17Q9H7H0 456 aaPredicted RBP-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 PNPLA6Q8IY17 1366 aa-2.62□□□□□ -2.83
RNU6-542P-201ENST00000516405 URB1O60287 2271 aaKnown RBP-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 IGHV3OR15-7A0A075B7D8 119 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 A0A1W2PQD3 144 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 GOLGA6L10A6NI86 522 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR5K4A6NMS3 321 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 P4HA2O15460 535 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 RHOCP08134 193 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 CD7P09564 240 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 PRKACAP17612 351 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 LAP3P28838 519 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 CCR2P41597 374 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 PPICP45877 212 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 ACLYP53396 1101 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 RAB4BP61018 213 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 RAB31Q13636 194 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 GOLGA7BQ2TAP0 167 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 MRPL51Q4U2R6 128 aaKnown RBP-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 CLLU1OSQ5K130 101 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 PYHIN1Q6K0P9 492 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 PROKR2Q8NFJ6 384 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC7A13Q8TCU3 470 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 RPS4Y2Q8TD47 263 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 PLEKHA8Q96JA3 519 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC38A2Q96QD8 506 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 MTMR9Q96QG7 549 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 UQCC2Q9BRT2 126 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 C11orf1Q9H5F2 150 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 ASB7Q9H672 318 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 TMEM100Q9NV29 134 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC39A1Q9NY26 324 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 DNAJC27Q9NZQ0 273 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 LSM7Q9UK45 103 aaKnown RBP-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 SLC22A14Q9Y267 594 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 NPHP4O75161 1426 aaPredicted RBP-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 KALRNO60229 2985 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 KIF24Q5T7B8 1368 aa-2.63□□□□□ -2.83
RNU6-542P-201ENST00000516405 NBASA2RRP1 2371 aa-2.64□□□□□ -2.83
RNU6-542P-201ENST00000516405 BIVM-ERCC5R4GMW8 1640 aa-2.64□□□□□ -2.83
RNU6-542P-201ENST00000516405 OR51F1A6NGY5 319 aa-2.64□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms