RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SNRNP40Q96DI7 357 aaKnown RBP9.67□□□□□ -0.86
TRIM41-209ENST00000515834 MFNGO00587 321 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 CLDN14O95500 239 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 GZMHP20718 246 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 MMP15P51511 669 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 CLDN20P56880 219 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 TCTAP57738 103 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRIM41-209ENST00000515834 ZNF385DQ9H6B1 395 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 M0R3E3 92 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 CHST1O43916 411 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 ZFPL1O95159 310 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 STARD10Q9Y365 291 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 MMP24Q9Y5R2 645 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 SCN9AQ15858 1988 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 ASXL3Q9C0F0 2248 aa9.67□□□□□ -0.86
TRIM41-209ENST00000515834 LOC389332A0A1B0GUA5 103 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 BAK1Q16611 211 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 ATP1A1-AS1Q5TC04 95 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 SLC25A42Q86VD7 318 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 SOSTQ9BQB4 213 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 RAB32Q13637 225 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 GUK1Q16774 197 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 STXBP6Q8NFX7 210 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 OR10J6PQ8NGY7 276 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 GSX2Q9BZM3 304 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 CCKARP32238 428 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 RIMKLAQ8IXN7 391 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 PACRGQ96M98 296 aaPredicted RBP9.66□□□□□ -0.86
TRIM41-209ENST00000515834 IL20Q9NYY1 176 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 OR51B2Q9Y5P1 312 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 APC2O95996 2303 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 SPAG17Q6Q759 2223 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 MFSD2BA6NFX1 497 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 OR5A2Q8NGI9 324 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 COX14Q96I36 57 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 ZNF488Q96MN9 340 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 OR2V2Q96R30 315 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 DPH3P1Q9H4G8 78 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 FLRT3Q9NZU0 649 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 LPAR3Q9UBY5 353 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 M0R2Z0 102 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 CIDEAO60543 219 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 NUBP1P53384 320 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 ERVS71-1P61550 626 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 GPX7Q96SL4 187 aaPredicted RBP9.66□□□□□ -0.86
TRIM41-209ENST00000515834 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 PHOX2AO14813 284 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRIM41-209ENST00000515834 ANKRD55Q3KP44 614 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 UNQ9370/PRO34162Q6UXP9 181 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 ZDHHC22Q8N966 263 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
TRIM41-209ENST00000515834 TRIP11Q15643 1979 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 TMEM262E9PQX1 116 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 PDLIM4P50479 330 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 TWIST1Q15672 202 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 SLC25A53Q5H9E4 307 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 GAPTQ8N292 157 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 SMIM4Q8WVI0 70 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 METTL1Q9UBP6 276 aaKnown RBP9.65□□□□□ -0.86
TRIM41-209ENST00000515834 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 WIPI2Q9Y4P8 454 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 PRDX2P32119 198 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 RNF165Q6ZSG1 346 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 PTX4Q96A99 478 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 OR10C1Q96KK4 312 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 HELTA6NFD8 242 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 TGOLN2O43493 480 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.86
TRIM41-209ENST00000515834 CTAG2O75638 210 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 PPOXP50336 477 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 RNF212Q495C1 297 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 NTNG2Q96CW9 530 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 TMEM38BQ9NVV0 291 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 A0A0B4J293 547 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 A0A1W2PRX2 142 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 IGSF23A1L1A6 192 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 SLC6A1P30531 599 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 RIGQ13278 110 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 TEX30Q5JUR7 227 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 MUC15Q8N387 334 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 OR1K1Q8NGR3 316 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 DTD1Q8TEA8 209 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 CCL28Q9NRJ3 127 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 MOB4Q9Y3A3 225 aa9.65□□□□□ -0.86
TRIM41-209ENST00000515834 DDX60LQ5H9U9 1706 aaKnown RBP9.65□□□□□ -0.86
TRIM41-209ENST00000515834 SYNGR1O43759 233 aa9.65□□□□□ -0.87
TRIM41-209ENST00000515834 OR2C3Q8N628 320 aa9.65□□□□□ -0.87
TRIM41-209ENST00000515834 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.87
TRIM41-209ENST00000515834 KCNK17Q96T54 332 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms