RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 OR1K1Q8NGR3 316 aa11.08□□□□□ -0.64
PHF3-212ENST00000515594 RDH5Q92781 318 aa11.08□□□□□ -0.64
PHF3-212ENST00000515594 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.64
PHF3-212ENST00000515594 TMED3Q9Y3Q3 217 aa11.08□□□□□ -0.64
PHF3-212ENST00000515594 MED13Q9UHV7 2174 aa11.08□□□□□ -0.64
PHF3-212ENST00000515594 SLC22A20A6NK97 555 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 SYNGR1O43759 233 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 IAPPP10997 89 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 SSR4P51571 173 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 HOXA4Q00056 320 aaPredicted RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 CLEC12BQ2HXU8 276 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 LCN15Q6UWW0 184 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 IL1F10Q8WWZ1 152 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 CPNE4Q96A23 557 aaPredicted RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 SIGLEC12Q96PQ1 595 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 TMPRSS5Q9H3S3 457 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 TUBA4BQ9H853 241 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 WSB1Q9Y6I7 421 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 OR6C6A6NF89 314 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 UNQ6494/PRO21346Q6UXR6 183 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 GGNQ86UU5 652 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 THNSL2Q86YJ6 484 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 ZNF100Q8IYN0 542 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 OR10D4PQ8NGN7 298 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 OR10D3Q8NH80 312 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 PLPPR1Q8TBJ4 325 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 ZNF665Q9H7R5 613 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 PINLYPA6NC86 204 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 ZNF716A6NP11 495 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 SCAF4O95104 1147 aaKnown RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 NGFP01138 241 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 SOD3P08294 240 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
PHF3-212ENST00000515594 Q6ZSR3 168 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 IMMP1LQ96LU5 166 aa11.07□□□□□ -0.64
PHF3-212ENST00000515594 KLK3P07288 261 aaPredicted RBP11.06□□□□□ -0.64
PHF3-212ENST00000515594 MMP9P14780 707 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
PHF3-212ENST00000515594 B3GALT5-AS1P59052 145 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 RAB11AP62491 216 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 RPL23AP62750 156 aaKnown RBP11.06□□□□□ -0.64
PHF3-212ENST00000515594 RAC1P63000 192 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIKESHIQ53FT3 197 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 Q6ZRM9 215 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 CMTM1Q8IZ96 169 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 CCDC71LQ8N9Z2 235 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 ZNF383Q8NA42 475 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 DEPPQ9NTK1 212 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
PHF3-212ENST00000515594 TAAR3PQ9P1P4 343 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BKO60814 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 IFNA17P01571 189 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BJP06899 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 NR2C1P13056 603 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BOP23527 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BBP33778 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 PAX9P55771 341 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BDP58876 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BCP62807 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST2H2BEQ16778 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.06□□□□□ -0.64
PHF3-212ENST00000515594 ZNF295-AS1Q8N0V1 137 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 COMMD1Q8N668 190 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BHQ93079 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BNQ99877 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 HIST1H2BMQ99879 126 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 PRRG4Q9BZD6 226 aa11.06□□□□□ -0.64
PHF3-212ENST00000515594 PITX3O75364 302 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 VAMP5O95183 116 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 OTX2P32243 289 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 FUT6P51993 359 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 ZNF266Q14584 549 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 FAM53AQ6NSI3 398 aaPredicted RBP11.05□□□□□ -0.64
PHF3-212ENST00000515594 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 ZNF880Q6PDB4 577 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 IL22RA1Q8N6P7 574 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 PHF7Q9BWX1 381 aaPredicted RBP11.05□□□□□ -0.64
PHF3-212ENST00000515594 ZNF552Q9H707 407 aaPredicted RBP11.05□□□□□ -0.64
PHF3-212ENST00000515594 PLEKHF2Q9H8W4 249 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 ZNF16P17020 682 aaPredicted RBP11.05□□□□□ -0.64
PHF3-212ENST00000515594 RAB2AP61019 212 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 AKR1C8PQ5T2L2 129 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 ASCL4Q6XD76 172 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 PFDN5Q99471 154 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 ZNF816-ZNF321PA0A0X1KG74 233 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 C5orf49A4QMS7 147 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 CXorf65A6NEN9 183 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 TK1P04183 234 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 CELA3AP09093 270 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 CST2P09228 141 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
PHF3-212ENST00000515594 PSG2P11465 335 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms