RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 PRB3Q04118 309 aaPredicted RBP12.58□□□□□ -0.4
TRIO-222ENST00000515144 TIGITQ495A1 244 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 HEXA-AS1Q9H8Q6 139 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 FFAR1O14842 300 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 HDHD3Q9BSH5 251 aaPredicted RBP12.58□□□□□ -0.4
TRIO-222ENST00000515144 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.58□□□□□ -0.4
TRIO-222ENST00000515144 UMAD1C9J7I0 102 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 LOXL3P58215 753 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 A0A1W2PRX2 142 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 BAK1Q16611 211 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 ETV3LQ6ZN32 361 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 OR1K1Q8NGR3 316 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 OR10A7Q8NGE5 316 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 C1QAP02745 245 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 NUP37Q8NFH4 326 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
TRIO-222ENST00000515144 RBPMS2Q6ZRY4 209 aaKnown RBP12.57□□□□□ -0.4
TRIO-222ENST00000515144 SLC51BQ86UW2 128 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 GUCD1Q96NT3 240 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 PLPP2O43688 288 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 PRDX2P32119 198 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 LCN2P80188 198 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 FAM3AP98173 230 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 VDAC1P21796 283 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 TRAT1Q6PIZ9 186 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 MARC2Q969Z3 335 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 GABRB1P18505 474 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 TMEM128Q5BJH2 165 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
TRIO-222ENST00000515144 CTAG2O75638 210 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 SPP1P10451 314 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 GLDNQ6ZMI3 551 aaPredicted RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 C14orf79Q96F83 325 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 RLFQ13129 1914 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 NKX2-6A6NCS4 301 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 SLC25A53Q5H9E4 307 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 SKA3Q8IX90 412 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 C10orf111Q8N326 155 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 LANCL1O43813 399 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 HOXA4Q00056 320 aaPredicted RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 PSG4Q00888 419 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 CD276Q5ZPR3 534 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 CENPVQ7Z7K6 275 aaPredicted RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
TRIO-222ENST00000515144 PF4P02776 101 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 CELA3AP09093 270 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 C1RLQ9NZP8 487 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 ARFGEF3Q5TH69 2177 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 MBP02144 154 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 PRDM14Q9GZV8 571 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 STARD10Q9Y365 291 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 PLAURQ03405 335 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 C12orf10Q9HB07 376 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 KLK13Q9UKR3 277 aa12.56□□□□□ -0.4
TRIO-222ENST00000515144 PAFAH1B2P68402 229 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 KCNMB1Q16558 191 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ZNF716A6NP11 495 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 MMP15P51511 669 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 FAM27E3Q08E93 113 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 ZPLD1Q8TCW7 415 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ROS1P08922 2347 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 PPP1CCP36873 323 aaKnown RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 RAB5CP51148 216 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 GNPNAT1Q96EK6 184 aaPredicted RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ABCA1O95477 2261 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 DYNLT3P51808 116 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 MUC15Q8N387 334 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 SSMEM1Q8WWF3 244 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 NBASA2RRP1 2371 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 ATP6V1G2-DDX39BF2Z307 99 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 ZNF658BQ4V348 819 aaPredicted RBP12.55□□□□□ -0.4
TRIO-222ENST00000515144 IGHA1P01876 353 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 IGHA2P01877 340 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 KCNJ3P48549 501 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
TRIO-222ENST00000515144 EXOGQ9Y2C4 368 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms