RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 MMP9P14780 707 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 RIGQ13278 110 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 C10orf111Q8N326 155 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 KISS1RQ969F8 398 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-214ENST00000515035 LRRC61Q9BV99 259 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 PLA2G2FQ9BZM2 168 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 TMEM140Q9NV12 185 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 LAMB2P55268 1798 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 TRBV23-1A0A0A0MS06 115 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 NTN1O95631 604 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 KIR2DS2P43631 304 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-214ENST00000515035 PRSS12P56730 875 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 TRA2AQ13595 282 aaKnown RBP eCLIP11.71□□□□□ -0.53
TCOF1-214ENST00000515035 LIMS2Q7Z4I7 341 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 OR1L3Q8NH93 324 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-214ENST00000515035 VSIG4Q9Y279 399 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 IGSF23A1L1A6 192 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 KCNAB3O43448 404 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 SRSF10O75494 262 aaKnown RBP11.71□□□□□ -0.54
TCOF1-214ENST00000515035 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.54
TCOF1-214ENST00000515035 VSIG10L2P0DP72 767 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 HERVK_113P61574 105 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 FOXO1Q12778 655 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 MESTQ5EB52 335 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 C1orf210Q8IVY1 113 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 WDFY1Q8IWB7 410 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 TRDCB7Z8K6 153 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 ISLRO14498 428 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 BCL2P10415 239 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 COMPP49747 757 aaPredicted RBP11.71□□□□□ -0.54
TCOF1-214ENST00000515035 EFNB2P52799 333 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 SKP2Q13309 424 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF547Q8IVP9 402 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 LRRC3BQ96PB8 259 aa11.71□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 C5orf67F2Z3F1 127 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 METAP1P53582 386 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 LYZP61626 148 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 SLC36A1Q7Z2H8 476 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 OR2M3Q8NG83 312 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 GNRHR2Q96P88 292 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 RPP25Q9BUL9 199 aaKnown RBP11.7□□□□□ -0.54
TCOF1-214ENST00000515035 PARD6GQ9BYG4 376 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-214ENST00000515035 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-214ENST00000515035 CISD3P0C7P0 127 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 TNFRSF1AP19438 455 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-214ENST00000515035 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 ASB5Q8WWX0 329 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 HAND1O96004 215 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 VSIG8P0DPA2 414 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 PLP1P60201 277 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 FOXC1Q12948 553 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
TCOF1-214ENST00000515035 PATE4P0C8F1 98 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 CCL7P80098 99 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 FLRT3Q9NZU0 649 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 PPIL1Q9Y3C6 166 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
TCOF1-214ENST00000515035 IGHV3-13P01766 116 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 IGHV3-7P01780 117 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 LDLRAD3Q86YD5 345 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 EID2BQ96D98 161 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 CT62P0C5K7 136 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-214ENST00000515035 OR11G2Q8NGC1 345 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 OR13G1Q8NGZ3 307 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 GPR61Q9BZJ8 451 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 CYR61O00622 381 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 CA2P00918 260 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 DEFB109BQ30KR1 87 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
TCOF1-214ENST00000515035 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 IL9P15248 144 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 SPEM2Q0P670 501 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 SLC25A33Q9BSK2 321 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 DMRT1Q9Y5R6 373 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 LINC01387J3KSC0 135 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 GAPDHP04406 335 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 MGAT2Q10469 447 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 RPEQ96AT9 228 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 MRPS18AQ9NVS2 196 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 MARF1Q9Y4F3 1742 aaKnown RBP11.68□□□□□ -0.54
TCOF1-214ENST00000515035 GOSR1O95249 250 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 RUNX1Q01196 453 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 SPATA45Q537H7 98 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 ZNF766Q5HY98 468 aa11.68□□□□□ -0.54
TCOF1-214ENST00000515035 VN1R4Q7Z5H5 301 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms