RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 OR2L8Q8NGY9 312 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 CLHC1Q8NHS4 586 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 ENKURQ8TC29 256 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 NT5CQ8TCD5 201 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 C2orf15Q8WU43 125 aaKnown RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 PDCD6IPQ8WUM4 868 aaKnown RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 RERGQ96A58 199 aaPredicted RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 FLYWCH2Q96CP2 140 aaKnown RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 NARS2Q96I59 477 aaKnown RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 OR4K3Q96R72 315 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 RBBP8Q99708 897 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 ZNRD1Q9P1U0 126 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 ZNF222Q9UK12 451 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 PPIL1Q9Y3C6 166 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 C2CD3Q4AC94 2353 aa3.25□□□□□ -1.89
RFC1-216ENST00000514572 HELZP42694 1942 aaKnown RBP3.25□□□□□ -1.89
RFC1-216ENST00000514572 IGHV6-1A0A0B4J1U7 121 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SPAARA0A1B0GVQ0 90 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 TMEM223A0PJW6 202 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 NDUFC2-KCTD14E9PQ53 114 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 MKRN2OSH3BPM6 223 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 TMX2-CTNND1H3BSU7 103 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 IGHV3-11P01762 117 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 MMP7P09237 267 aaPredicted RBP3.24□□□□□ -1.89
RFC1-216ENST00000514572 SLC35E2BP0CK96 405 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 C16orf72Q14CZ0 275 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 ZNF691Q5VV52 312 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 RESP18Q5W5W9 173 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 ERICH5Q6P6B1 374 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 OPN5Q6U736 354 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SSX6Q7RTT6 188 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 LINC01551Q86U37 167 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 RIMKLAQ8IXN7 391 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SLC34A3Q8N130 599 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 OR4M1Q8NGD0 313 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 OR1J4Q8NGS1 313 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SPPL2BQ8TCT7 592 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 RORBQ92753 470 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 GHSRQ92847 366 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 CDS1Q92903 461 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 NEURL3Q96EH8 262 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SERPINB11Q96P15 392 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 TRNT1Q96Q11 434 aaKnown RBP3.24□□□□□ -1.89
RFC1-216ENST00000514572 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 SLC17A9Q9BYT1 436 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 WFDC1Q9HC57 220 aa3.24□□□□□ -1.89
RFC1-216ENST00000514572 ANKRD17O75179 2603 aaKnown RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 TRAV8-6A0A0B4J262 113 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 CDIPTO14735 213 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 LDOC1O95751 146 aaPredicted RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 MT-ND4P03905 459 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 TEAD1P28347 426 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 APLNRP35414 380 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 ERFP50548 548 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 TSPAN5P62079 268 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 NAB1Q13506 487 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 SYT6Q5T7P8 510 aaPredicted RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 CD302Q8IX05 232 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 NELFCDQ8IXH7 590 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 SPICQ8N5J4 248 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 ATPAF2Q8N5M1 289 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 OR1L1Q8NH94 360 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 DCAKDQ8WVC6 231 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 OR5P2Q8WZ92 322 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 GTF2H4Q92759 462 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 S100PBPQ96BU1 408 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 CYTH2Q99418 400 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 CTRCQ99895 268 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 ZNF649Q9BS31 505 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 BBS2Q9BXC9 721 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 SHCBP1LQ9BZQ2 653 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 WDR55Q9H6Y2 383 aaPredicted RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 CCL26Q9Y258 94 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 NOSIPQ9Y314 301 aaKnown RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 TMEM14AQ9Y6G1 99 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 PCDH15Q96QU1 1955 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 ANKRD12Q6UB98 2062 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 MYLKQ15746 1914 aa3.23□□□□□ -1.89
RFC1-216ENST00000514572 UTP20O75691 2785 aaKnown RBP3.23□□□□□ -1.89
RFC1-216ENST00000514572 SETD2Q9BYW2 2564 aaPredicted RBP3.22□□□□□ -1.89
RFC1-216ENST00000514572 NBPF19A0A087WUL8 3843 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 IGHV7-4-1A0A0J9YVY3 117 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 C5orf63A6NC05 138 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 J3QKU1 62 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 MYL12BO14950 172 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 SGCEO43556 437 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 CCDC22O60826 627 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 SHOX2O60902 331 aaPredicted RBP3.22□□□□□ -1.89
RFC1-216ENST00000514572 CBR3O75828 277 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 APODP05090 189 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 OR4Q2P0C623 313 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 HLA-EP13747 358 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 MAGEA6P43360 314 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 TAS2R31P59538 309 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 UBE2KP61086 200 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 RPL10AP62906 217 aaKnown RBP3.22□□□□□ -1.89
RFC1-216ENST00000514572 TPBGQ13641 420 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 OR4D1Q15615 310 aa3.22□□□□□ -1.89
RFC1-216ENST00000514572 CEACAM16Q2WEN9 425 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms