RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 KRBOX4Q5JUW0 171 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 LIN54Q6MZP7 749 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 FUNDC1Q8IVP5 155 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 TMEM61Q8N0U2 210 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 LYPD1Q8N2G4 141 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RNF148Q8N7C7 305 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 FAM86B1Q8N7N1 296 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 YIPF7Q8N8F6 280 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 LFNGQ8NES3 379 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 OR6N2Q8NGY6 317 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 OR11H2Q8NH07 326 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 CACNG8Q8WXS5 425 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RITA1Q96K30 269 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RHOVQ96L33 236 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 ABHD6Q9BV23 337 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 PARP12Q9H0J9 701 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 PPIL3Q9H2H8 161 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 EGLN3Q9H6Z9 239 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 NIPAL2Q9H841 368 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 MRM2Q9UI43 246 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 ZNF580Q9UK33 172 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 TRAV39A0A0B4J263 110 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 KBTBD11-OT1A0A1B0GTJ5 212 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 C13orf42A0A1B0GVH6 325 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 APOC1P02654 83 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 HLA-DMBP28068 263 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 CD1BP29016 333 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 ERP29P30040 261 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 FMO3P31513 532 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 SSTR5P35346 364 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RIPPLY1Q0D2K3 151 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 ZNF816Q0VGE8 651 aaPredicted RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 VMACQ2NL98 169 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 SPATS1Q496A3 300 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 UNQ5815/PRO19632Q6UWF5 114 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 SLC25A26Q70HW3 274 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RNF113BQ8IZP6 322 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 OFCC1Q8IZS5 231 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 OR8H1Q8NGG4 311 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 FANK1Q8TC84 345 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 RDH12Q96NR8 316 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 POLR2J2Q9GZM3 115 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 POLR2J3Q9H1A7 115 aaKnown RBP2.38□□□□□ -2.03
CHD1-211ENST00000514344 OR52D1Q9H346 318 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 THAP1Q9NVV9 213 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 PEMTQ9UBM1 199 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 ERGIC3Q9Y282 383 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
CHD1-211ENST00000514344 A0A0B4J203 849 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 PQLC2LA1A4F0 135 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF729A6NN14 1252 aaPredicted RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 BMPR1BO00238 502 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ANGPT2O15123 496 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ARPC1BO15143 372 aaKnown RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 OR2H2O95918 312 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 HLA-DRB1P01911 266 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF44P15621 663 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 H2AFXP16104 143 aaPredicted RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 PRKACAP17612 351 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 HTR1FP30939 366 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 IDH3AP50213 366 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 MECP2P51608 486 aaKnown RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 ALDH3A2P51648 485 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 XGP55808 180 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF91Q05481 1191 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 PLGLAQ15195 96 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 C4orf48Q5BLP8 95 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF660Q6AZW8 331 aaPredicted RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 PYHIN1Q6K0P9 492 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 DLEU7Q6UYE1 221 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 PLEKHG7Q6ZR37 379 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 Q6ZSN1 163 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ERI1Q8IV48 349 aaKnown RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 KIRREL3Q8IZU9 778 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF565Q8N9K5 539 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 OR13A1Q8NGR1 328 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 OR2T4Q8NH00 348 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 OR51E1Q8TCB6 317 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 MRGPRDQ8TDS7 321 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 RNF133Q8WVZ7 376 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 CORO2AQ92828 525 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 COQ2Q96H96 371 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 C17orf77Q96MU5 243 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ZNF251Q9BRH9 671 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 OSBPL10Q9BXB5 764 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 KAT8Q9H7Z6 458 aaKnown RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 SEBOXQ9HB31 216 aaPredicted RBP2.37□□□□□ -2.03
CHD1-211ENST00000514344 GPR84Q9NQS5 396 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 CALYQ9NYX4 217 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 ENPP5Q9UJA9 477 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 MEIKINA0A087WXM9 373 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 UNC119BA6NIH7 251 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 TRPC5OSA6NMA1 111 aa2.37□□□□□ -2.03
CHD1-211ENST00000514344 RGS16O15492 202 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms