RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 KLF17Q5JT82 389 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 PRAMEF5Q5TYX0 476 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 METTL11BQ5VVY1 283 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 RSBN1Q5VWQ0 802 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 OLFML2AQ68BL7 652 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 BAIAP2L2Q6UXY1 529 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 C5orf24Q7Z6I8 188 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 PNKDQ8N490 385 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 DTX3Q8N9I9 347 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 OR13A1Q8NGR1 328 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 MRGPRDQ8TDS7 321 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 CCDC107Q8WV48 283 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 C22orf15Q8WYQ4 148 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 LHX4Q969G2 390 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 ISOC1Q96CN7 298 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 SLC25A38Q96DW6 304 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 MRPS24Q96EL2 167 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 WDFY2Q96P53 400 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 HDHD3Q9BSH5 251 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 URM1Q9BTM9 101 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 SEBOXQ9HB31 216 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 CEPT1Q9Y6K0 416 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 FOXI3A8MTJ6 420 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 MCRIP1C9JLW8 97 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 H3BMQ9 156 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 J3QL48 77 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 J3QLI3 93 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 NOL3O60936 208 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 MMP23AO75900 390 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 CSN2P05814 226 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 PF4V1P10720 104 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 HOXB4P17483 251 aaPredicted RBP8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 OMGP23515 440 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 GATA3P23771 443 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 COX7A1P24310 79 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 SSTR5P35346 364 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 GDNFP39905 211 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 DLX6P56179 175 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 MADCAM1Q13477 382 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 LTC4SQ16873 150 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 PLAC9Q5JTB6 97 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 BRD3OSQ6XYD6 125 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 Q6ZPA2 131 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 USP43Q70EL4 1123 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 IZUMO1Q8IYV9 350 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 OR5D13Q8NGL4 314 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 OR4K15Q8NH41 348 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 RAB2BQ8WUD1 216 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 SLC25A46Q96AG3 418 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 ARHGAP5-AS1Q96IT6 56 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 ZNF714Q96N38 554 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 FAAP24Q9BTP7 215 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 ATG5Q9H1Y0 275 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 ZMAT3Q9HA38 289 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 ETAA1Q9NY74 926 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 RAB22AQ9UL26 194 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 NF1P21359 2839 aa8.04□□□□□ -1.12
TOPBP1-209ENST00000513818 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 TRGV10A0A0A0MS01 117 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 MDFIC2A0A1B0GVS7 189 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 hADV38S2A0JD32 116 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 TMEM30CPA0ZSE6 113 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A10PA6NDY2 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A18PA6NE21 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A16PA6NEW6 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A20PA6NIJ5 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A8PA6NJQ4 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A7PA6NKC0 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A22PA8MWA6 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A12PA8MX19 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A5PA8MXJ8 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A23PA8MXZ1 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FSHBP01225 129 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A15PP0C7V4 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A13PP0C7W8 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A14PP0C7W9 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM90A24PP0C7X0 464 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 ZNF728P0DKX0 622 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 GNB3P16520 340 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 RAB6AP20340 208 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 HNF1AP20823 631 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FUT3P21217 361 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 TMEM50BP56557 158 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 UTF1Q5T230 341 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM53AQ6NSI3 398 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 ZNF497Q6ZNH5 498 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 CMTM4Q8IZR5 234 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM89BQ8N5H3 189 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 C11orf42Q8N5U0 333 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 KIR3DL3Q8N743 410 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 SETD6Q8TBK2 473 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 MRPL30Q8TCC3 161 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 UPRTQ96BW1 309 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 NEDD4LQ96PU5 975 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 BEX2Q9BXY8 128 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 PECRQ9BY49 303 aa8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 RBM38Q9H0Z9 239 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-209ENST00000513818 SPACA1Q9HBV2 294 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms