RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SCOCQ9UIL1 159 aa10.97□□□□□ -0.65
SPCS3-204ENST00000513139 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
SPCS3-204ENST00000513139 UBE2J1Q9Y385 318 aaPredicted RBP10.97□□□□□ -0.65
SPCS3-204ENST00000513139 MOB4Q9Y3A3 225 aa10.97□□□□□ -0.65
SPCS3-204ENST00000513139 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
SPCS3-204ENST00000513139 PNMA8CA0A1B0GUJ8 204 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 LOC107986453A0A1B0GWG9 222 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 TMEM82A0PJX8 343 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 OOSP1A8MZH6 123 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 SYT7O43581 403 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 MNDAP41218 407 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 GABARAPL2P60520 117 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 MRPL28Q13084 256 aaKnown RBP10.96□□□□□ -0.65
SPCS3-204ENST00000513139 EDDM3AQ14507 147 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 SPHARQ15513 63 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 MED22Q15528 200 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 CCDC58Q4VC31 144 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 CCDC144NLQ6NUI1 221 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 THNSL2Q86YJ6 484 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 SPARTQ8N0X7 666 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 OR51A4Q8NGJ6 313 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 OR14K1Q8NGZ2 314 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 MND1Q9BWT6 205 aa10.96□□□□□ -0.65
SPCS3-204ENST00000513139 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 MMP23AO75900 390 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 ISG15P05161 165 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 UBCP0CG48 685 aaKnown RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 CCL1P22362 96 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 CD34P28906 385 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 ERP29P30040 261 aaKnown RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 RAB25P57735 213 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 CDK5R1Q15078 307 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 TMEM244Q5VVB8 128 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 DMKNQ6E0U4 476 aaPredicted RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 HEPN1Q6WQI6 88 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 BATF2Q8N1L9 274 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 OR8U1Q8NH10 309 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 RGP1Q92546 391 aaPredicted RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 GHSRQ92847 366 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 NOL4LQ96MY1 436 aaPredicted RBP10.95□□□□□ -0.66
SPCS3-204ENST00000513139 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 GAL3ST2Q9H3Q3 398 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 V9GYS6 101 aa10.95□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A18PA6NE21 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A16PA6NEW6 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A20PA6NIJ5 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 TMEM212A6NML5 194 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A9PA6NNJ1 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 DHRS7CA6NNS2 312 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 SERPINE3A8MV23 424 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A12PA8MX19 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A5PA8MXJ8 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 SEC14L6B5MCN3 397 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 BUB1B-PAK6H3BSN5 160 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FGF16O43320 207 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A15PP0C7V4 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A13PP0C7W8 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A14PP0C7W9 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FAM90A24PP0C7X0 464 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 HSMCR30P0CW71 290 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 CELP19835 753 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 KIR2DS1Q14954 304 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 GRK1Q15835 563 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 ZNF773Q6PK81 442 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 Q6ZSR3 168 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 TRAPPC6BQ86SZ2 158 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 ANGPTL5Q86XS5 388 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 TPRX1Q8N7U7 411 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 C5orf56Q8N8D9 126 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 OR52N4Q8NGI2 321 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 OR13C5Q8NGS8 318 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 HAVCR2Q8TDQ0 301 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 FGGYQ96C11 551 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 ACOT13Q9NPJ3 140 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 GPR173Q9NS66 373 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 MTCH1Q9NZJ7 389 aa10.94□□□□□ -0.66
SPCS3-204ENST00000513139 F8VVB4 439 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 F8VWA3 439 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 MGST3O14880 152 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 IGHG2P01859 326 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 CDX1P47902 265 aaPredicted RBP10.93□□□□□ -0.66
SPCS3-204ENST00000513139 INSL3P51460 131 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 PRRX1P54821 245 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 FOXRED2Q8IWF2 684 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 CORO2AQ92828 525 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 SMIM19Q96E16 107 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 ADAT3Q96EY9 351 aaPredicted RBP10.93□□□□□ -0.66
SPCS3-204ENST00000513139 PGLYRP3Q96LB9 341 aa10.93□□□□□ -0.66
SPCS3-204ENST00000513139 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms