RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RNF150Q9ULK6 438 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 A3GALT2U3KPV4 340 aa6.82□□□□□ -1.32
CLCN3-208ENST00000512813 A0A0B4J203 849 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 A0A0G2JLM5 398 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 A0A0U1RQV5 110 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 UNC119BA6NIH7 251 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 NPIPB11E5RHQ5 1161 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 LOC110117498-PIK3R3F6TDL0 507 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 J3KTA2 159 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 DEFB4AO15263 64 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 HLA-DMBP28068 263 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 FMO3P31513 532 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 VHLP40337 213 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 YAP1P46937 504 aaKnown RBP6.81□□□□□ -1.32
CLCN3-208ENST00000512813 OMPP47874 163 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 MRPL19P49406 292 aaKnown RBP6.81□□□□□ -1.32
CLCN3-208ENST00000512813 LRP2P98164 4655 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 AKIRIN2Q53H80 203 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 KRBOX4Q5JUW0 171 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 SPIN3Q5JUX0 258 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 TMEM42Q69YG0 159 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 Q8IYB0 196 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 MREGQ8N565 214 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF511Q8NB15 262 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 SLAMF9Q96A28 289 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 AMELYQ99218 206 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 ANKRD19PQ9H560 264 aa6.81□□□□□ -1.32
CLCN3-208ENST00000512813 NACAE9PAV3 2078 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 NBR2O15453 112 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 GSC2O15499 205 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 IDH3BO43837 385 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 ENTPD6O75354 484 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 OR2H2O95918 312 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 IFNA21P01568 189 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 IFNA17P01571 189 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 H2BFMP0C1H6 154 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 IL3RAP26951 378 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 HTR1FP30939 366 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 GLP1RP43220 463 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 CLVS2Q5SYC1 327 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 C6orf223Q8N319 242 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 LINC00311Q8N616 119 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 OR10A7Q8NGE5 316 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 OR13A1Q8NGR1 328 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 OR11H2Q8NH07 326 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 MRGPRDQ8TDS7 321 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 IFT27Q9BW83 186 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 TMEM120AQ9BXJ8 343 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 CADM1Q9BY67 442 aaKnown RBP6.8□□□□□ -1.32
CLCN3-208ENST00000512813 PPIL3Q9H2H8 161 aaKnown RBP6.8□□□□□ -1.32
CLCN3-208ENST00000512813 OR52D1Q9H346 318 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 MAP6D1Q9H9H5 199 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 SNX13Q9Y5W8 968 aa6.8□□□□□ -1.32
CLCN3-208ENST00000512813 TRBV2A0A0J9YWF9 115 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 FAM229AH3BQW9 127 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 H3BUA1 57 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 BIRC5O15392 142 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 INMTO95050 263 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 NDUFA3O95167 84 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 IGLV3-1P01715 115 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-208ENST00000512813 FOLR2P14207 255 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 GZMMP51124 257 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF137PP52743 207 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 RPS16P62249 146 aaKnown RBP6.79□□□□□ -1.32
CLCN3-208ENST00000512813 CX3CL1P78423 397 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 LSAMPQ13449 338 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 LTC4SQ16873 150 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 RNF212Q495C1 297 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF343Q6P1L6 599 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 PPP1R27Q86WC6 154 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 C8orf31Q8N9H6 132 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF565Q8N9K5 539 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 POC5Q8NA72 575 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 OR13C5Q8NGS8 318 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 OR10A6Q8NH74 314 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 RBFOX1Q9NWB1 397 aaKnown RBP6.79□□□□□ -1.32
CLCN3-208ENST00000512813 DHDHQ9UQ10 334 aa6.79□□□□□ -1.32
CLCN3-208ENST00000512813 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 DHRS3O75911 302 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 IFNA14P01570 189 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 RPL35AP18077 110 aaKnown RBP6.78□□□□□ -1.32
CLCN3-208ENST00000512813 EDN2P20800 178 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 AADACP22760 399 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 ADARB1P78563 741 aaKnown RBP6.78□□□□□ -1.32
CLCN3-208ENST00000512813 ATXN7L3Q14CW9 347 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-208ENST00000512813 CYBRD1Q53TN4 286 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 SLC35F1Q5T1Q4 408 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 SLC25A26Q70HW3 274 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 COMMD2Q86X83 199 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-208ENST00000512813 FAM58AQ8N1B3 248 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 LFNGQ8NES3 379 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 NPBQ8NG41 125 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 TMEM163Q8TC26 289 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 ABHD5Q8WTS1 349 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 RITA1Q96K30 269 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms