RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 LINC00696Q6ZRV3 163 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 SUMF2Q8NBJ7 301 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 OR8G5Q8NG78 346 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 OR1K1Q8NGR3 316 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 SECTM1Q8WVN6 248 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 NANOS1Q8WY41 292 aaKnown RBP7.89□□□□□ -1.15
CPNE4-210ENST00000512332 BCL2L2Q92843 193 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-210ENST00000512332 OR51I2Q9H344 312 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 C19orf12Q9NSK7 152 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 LYRM2Q9NU23 88 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-210ENST00000512332 TREM2Q9NZC2 230 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 MLXQ9UH92 298 aa7.89□□□□□ -1.15
CPNE4-210ENST00000512332 IGKV1D-13A0A0B4J2D9 117 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 CDX4O14627 284 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-210ENST00000512332 AGPAT2O15120 278 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 PITX3O75364 302 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 IL18BPO95998 194 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 IGKV1-13P0DP09 117 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 CD46P15529 392 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 S100GP29377 79 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 WNT5AP41221 380 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 ID4P47928 161 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 CAMLGP49069 296 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 BAXQ07812 192 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 GUK1Q16774 197 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 MIDNQ504T8 468 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 CLEC9AQ6UXN8 241 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 FAM58AQ8N1B3 248 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 LILRB1Q8NHL6 650 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-210ENST00000512332 CABLES2Q9BTV7 478 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 EGLN1Q9GZT9 426 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 HIPK2Q9H2X6 1198 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 TUBA4BQ9H853 241 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 SMCO4Q9NRQ5 59 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 TRAV24A0A0B4J272 114 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 LRP5LA4QPB2 252 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 K7N7A8 449 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 PGLYRP1O75594 196 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-210ENST00000512332 FOLR2P14207 255 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 PRKACAP17612 351 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 F2RP25116 425 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 SOX8P57073 446 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 TSC22D1Q15714 1073 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 SHEQ5VZ18 495 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF324BQ6AW86 544 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-210ENST00000512332 H1FOOQ8IZA3 346 aaPredicted RBP7.88□□□□□ -1.15
CPNE4-210ENST00000512332 BATF2Q8N1L9 274 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 NEK7Q8TDX7 302 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 IL36RNQ9UBH0 155 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 IL17BQ9UHF5 180 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 OR2W1Q9Y3N9 320 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF175Q9Y473 711 aa7.88□□□□□ -1.15
CPNE4-210ENST00000512332 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 FAM24AA6NFZ4 105 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 PROB1E7EW31 1015 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 J3QT63 122 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 HSPA12AO43301 675 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 MDH2P40926 338 aaKnown RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 POLR2GP62487 172 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF616Q08AN1 781 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 OR8G1Q15617 311 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 C20orf204Q6ZNR8 217 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 MOB1BQ7L9L4 216 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 Q8IYB0 196 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 C15orf54Q8N8G6 183 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 WDYHV1Q96HA8 205 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 AKR1E2Q96JD6 320 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 CCL28Q9NRJ3 127 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 DLL3Q9NYJ7 618 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 PRSS50Q9UI38 385 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 KNTC1P50748 2209 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 VPS13AQ96RL7 3174 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 IGSF23A1L1A6 192 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 BTBD17A6NE02 478 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 COLCA2A8K830 154 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 DEGS1O15121 323 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 ADAM20O43506 726 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 PRH1P02810 166 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 NFYBP25208 207 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 RAB13P51153 203 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 NOVA1P51513 510 aaKnown RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 VAMP2P63027 116 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 HLA-DRB3P79483 266 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 CXorf66Q5JRM2 361 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 AVPI1Q5T686 147 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 HSD17B11Q8NBQ5 300 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 OR10J5Q8NHC4 309 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 PLPPR1Q8TBJ4 325 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 GNPNAT1Q96EK6 184 aaPredicted RBP7.87□□□□□ -1.15
CPNE4-210ENST00000512332 SH3BGRL3Q9H299 93 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 GLRX2Q9NS18 164 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 RNF115Q9Y4L5 304 aa7.87□□□□□ -1.15
CPNE4-210ENST00000512332 DNAJC13O75165 2243 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF407Q9C0G0 2248 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 A0A1B0GU03 582 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 LILRA1O75019 489 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 TNFSF15O95150 251 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms