RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 Q8TCH9 128 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 C22orf15Q8WYQ4 148 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 PRRT1Q99946 306 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 ELL3Q9HB65 397 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 CA10Q9NS85 328 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 PLEKHJ1Q9NW61 149 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 ZDHHC8Q9ULC8 765 aa8.75□□□□□ -1.01
PDLIM5-217ENST00000512274 IFNL4K9M1U5 179 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 GEMIN2O14893 280 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 SYNGR1O43759 233 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 PEX14O75381 377 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 RAB3DO95716 219 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 NAPSAO96009 420 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 DHFRP00374 187 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 CD3DP04234 171 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 BCL3P20749 454 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 MDH2P40926 338 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 NPBWR2P48146 333 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 MAB21L1Q13394 359 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 EFNB3Q15768 340 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 TAF9Q16594 264 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 RNASE10Q5GAN6 216 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 DMRTC1Q5HYR2 192 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 C11orf53Q8IXP5 236 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 BPIFB2Q8N4F0 458 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 NUDCD2Q8WVJ2 157 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 SNAPC3Q92966 411 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 NEURL2Q9BR09 285 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 IFT46Q9NQC8 304 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 DECR2Q9NUI1 292 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 MYEF2Q9P2K5 600 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 IL19Q9UHD0 177 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 SCP2D1Q9UJQ7 156 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 FZR1Q9UM11 496 aa8.74□□□□□ -1.01
PDLIM5-217ENST00000512274 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 A0A0B4J293 547 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 DISC1C4P0D8 188 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 PFDN1O60925 122 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 MT-ND4P03905 459 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 MSMBP08118 114 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 SERPINF1P36955 418 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 ECI1P42126 302 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 UBE2MP61081 183 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 ARFRP1Q13795 201 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 RBM39Q14498 530 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 SURF2Q15527 256 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 GRK1Q15835 563 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 TATDN3Q17R31 274 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 FIP1L1Q6UN15 594 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 WDR82Q6UXN9 313 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 OVCH2Q7RTZ1 564 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 C6orf201Q7Z4U5 140 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 CLDND2Q8NHS1 167 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 SLAMF9Q96A28 289 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 C20orf85Q9H1P6 137 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 MMP28Q9H239 520 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 GHITMQ9H3K2 345 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 C12orf4Q9NQ89 552 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 NUDT15Q9NV35 164 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 MGAT4AQ9UM21 535 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 NOTCH1P46531 2555 aa8.73□□□□□ -1.01
PDLIM5-217ENST00000512274 LINC00854A0A1B0GVQ3 168 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 PLSCR5A0PG75 271 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 HMX3A6NHT5 357 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ZSCAN5BA6NJL1 495 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 SNRPGP15A8MWD9 76 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 SRRM5B3KS81 715 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 FSTL3O95633 263 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 KNG1P01042 644 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 FCER2P06734 321 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 FCGR3AP08637 254 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 GABRR1P24046 479 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ADIPOQQ15848 244 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 PIGYQ3MUY2 71 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 RSBN1Q5VWQ0 802 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 Q6P435 159 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ZNF880Q6PDB4 577 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 MOB1BQ7L9L4 216 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ZNF554Q86TJ5 538 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 LHFPL1Q86WI0 220 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 BEST4Q8NFU0 473 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 OR5AP2Q8NGF4 316 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 SULT4A1Q9BR01 284 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 MRPL37Q9BZE1 423 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 NCOR1P1Q9H4R4 102 aa8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ZMAT3Q9HA38 289 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-217ENST00000512274 NBEAL2Q6ZNJ1 2754 aa8.71□□□□□ -1.01
PDLIM5-217ENST00000512274 B9A039 149 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 F8VVB4 439 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 F8VWA3 439 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 H0YL77 283 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 WNT9BO14905 357 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 RHBDL1O75783 438 aa8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 OR7C1O76099 320 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-217ENST00000512274 PLATP00750 562 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms