RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 OR51A4Q8NGJ6 313 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 OR13C5Q8NGS8 318 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 OR14K1Q8NGZ2 314 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 NDNFQ8TB73 568 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 REEP6Q96HR9 211 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 MGLLQ99685 303 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 OR10A2Q9H208 303 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 SP140LQ9H930 580 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 ISYNA1Q9NPH2 558 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 GPR84Q9NQS5 396 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 LINC00527Q9UJ94 153 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 A3GALT2U3KPV4 340 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 A0A0U1RQV5 110 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 A6NIN4 97 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 XRCC2O43543 280 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 AIREO43918 545 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 OR2F2O95006 317 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 ISG15P05161 165 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 HSMCR30P0CW71 290 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 IGHV1-8P0DP01 117 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 SPNP16150 400 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 CPEP16870 476 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 CELP19835 753 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 CCL1P22362 96 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 GADD45AP24522 165 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 CAPZA1P52907 286 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 VBP1P61758 197 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 NCS1P62166 190 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 RPS11P62280 158 aaKnown RBP eCLIP7.13□□□□□ -1.27
NUP54-211ENST00000512151 BDH1Q02338 343 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 MLLT11Q13015 90 aaPredicted RBP7.13□□□□□ -1.27
NUP54-211ENST00000512151 MRPL28Q13084 256 aaKnown RBP7.13□□□□□ -1.27
NUP54-211ENST00000512151 TPBGQ13641 420 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 ZNF846Q147U1 533 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 LIPKQ5VXJ0 399 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 OR10Z1Q8NGY1 313 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 S100ZQ8WXG8 99 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 GHSRQ92847 366 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 SDSLQ96GA7 329 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 RBM14Q96PK6 669 aaKnown RBP7.13□□□□□ -1.27
NUP54-211ENST00000512151 MOB1AQ9H8S9 216 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 AKIP1Q9NQ31 210 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 V9GYS6 101 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 TNCP24821 2201 aa7.13□□□□□ -1.27
NUP54-211ENST00000512151 DYNC1H1Q14204 4646 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 LOC107986453A0A1B0GWG9 222 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 ANKRD30BLA7E2S9 258 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 CCRL2O00421 344 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 CD1AP06126 327 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 LSM3P62310 102 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 RPS25P62851 125 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 INSL4Q14641 139 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 TIMM50Q3ZCQ8 353 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 TMEM244Q5VVB8 128 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 CD177Q8N6Q3 437 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 ZNF676Q8N7Q3 588 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 OR6Q1Q8NGQ2 317 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 OR13D1Q8NGV5 346 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 OR5AK2Q8NH90 309 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 ORAI1Q96D31 301 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 WDR12Q9GZL7 423 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 SLIRPQ9GZT3 109 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 NXF2Q9GZY0 626 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 HMG20AQ9NP66 347 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 CCDC59Q9P031 241 aaKnown RBP7.12□□□□□ -1.27
NUP54-211ENST00000512151 KIAA1456Q9P272 454 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 RHBDD3Q9Y3P4 386 aa7.12□□□□□ -1.27
NUP54-211ENST00000512151 TRBV5-5A0A0J9YX44 114 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 TMEM212A6NML5 194 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 SYT7O43581 403 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 SLC25A17O43808 307 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 UBCP0CG48 685 aaKnown RBP7.11□□□□□ -1.27
NUP54-211ENST00000512151 IGHV4-30-4P0DP06 118 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 GP9P14770 177 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 TAS2R43P59537 309 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 KIR2DS1Q14954 304 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 TMEM91Q6ZNR0 172 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 Q6ZNX1 250 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 KRT74Q7RTS7 529 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 OR8U1Q8NH10 309 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 HAVCR2Q8TDQ0 301 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 CAPSLQ8WWF8 208 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 UFD1Q92890 307 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 FGGYQ96C11 551 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 ADAT3Q96EY9 351 aaPredicted RBP7.11□□□□□ -1.27
NUP54-211ENST00000512151 AKR1E2Q96JD6 320 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 DCSTAMPQ9H295 470 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 PPIL3Q9H2H8 161 aaKnown RBP7.11□□□□□ -1.27
NUP54-211ENST00000512151 RGCCQ9H4X1 137 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 RETNQ9HD89 108 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 DSCAML1Q8TD84 2053 aa7.11□□□□□ -1.27
NUP54-211ENST00000512151 hCG_1809904A0A1W2PP81 198 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 A0A1W2PPE2 198 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 A0A1W2PR64 198 aa7.1□□□□□ -1.27
NUP54-211ENST00000512151 A0A1W2PRV1 198 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms