RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ETAA1	Q9NY74	926 aa		11.95	□□□□□ -0.5
MATR3-238	ENST00000512107	WNK2	Q9Y3S1	2297 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	SVEP1	Q4LDE5	3571 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107		A0A075B6Q4	140 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	TRAV20	A0A0B4J274	112 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	MCRIP1	C9JLW8	97 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	SSX5	O60225	188 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	FOSL1	P15407	271 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	HIST1H1D	P16402	221 aa	Known RBP	11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	SCAND1	P57086	179 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	PAX5	Q02548	391 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	KLF17	Q5JT82	389 aa	Predicted RBP	11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	UBE2NL	Q5JXB2	153 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	SLC35E4	Q6ICL7	350 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	OR56B1	Q8NGI3	324 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	OR5D13	Q8NGL4	314 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	NEDD4L	Q96PU5	975 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	YAE1D1	Q9NRH1	226 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	HSF4	Q9ULV5	492 aa		11.94	□□□□□ -0.5
MATR3-238	ENST00000512107	TRAV18	A0A075B6X5	111 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	IGKV1D-8	A0A087WSZ0	117 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	MEIKIN	A0A087WXM9	373 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	TMEM235	A6NFC5	223 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	ENSA	O43768	121 aa	Known RBP	11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	ECD	O95905	644 aa	Predicted RBP	11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	NAPSA	O96009	420 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	HEXA	P06865	529 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	RCC1	P18754	421 aa	Predicted RBP	11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	GUCA2A	Q02747	115 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	KLRD1	Q13241	179 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	CNPY1	Q3B7I2	92 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	CDNF	Q49AH0	187 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	DCAF12L2	Q5VW00	463 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	ZNF880	Q6PDB4	577 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	CLEC9A	Q6UXN8	241 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	GLCCI1	Q86VQ1	547 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	PNKD	Q8N490	385 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	MRGPRD	Q8TDS7	321 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	NEK7	Q8TDX7	302 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	MAFIP	Q8WZ33	124 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	CORO2A	Q92828	525 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	TNFRSF14	Q92956	283 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	RAB3C	Q96E17	227 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	FAHD2A	Q96GK7	314 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	POM121	Q96HA1	1249 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	PLEKHJ1	Q9NW61	149 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	NDUFA13	Q9P0J0	144 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	ONECUT1	Q9UBC0	465 aa		11.93	□□□□□ -0.5
MATR3-238	ENST00000512107	IGHV3OR16-10	A0A075B7F0	116 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	TRBV23-1	A0A0A0MS06	115 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107		A0A1W2PQ09	198 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	C17orf98	A8MV24	154 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	C15orf65	H3BRN8	121 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	GPR37	O15354	613 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	TMEM127	O75204	238 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	HLA-DQB1	P01920	261 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	GLA	P06280	429 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	OMG	P23515	440 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	SSTR5	P35346	364 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	DYNC1I2	Q13409	638 aa	Known RBP	11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	CR1L	Q2VPA4	569 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	PRAMEF5	Q5TYX0	476 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	CD276	Q5ZPR3	534 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	MCFD2	Q8NI22	146 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	PPP1R35	Q8TAP8	253 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	NUDCD2	Q8WVJ2	157 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	ACOT12	Q8WYK0	555 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	SPACA1	Q9HBV2	294 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	SIRT7	Q9NRC8	400 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	TLN2	Q9Y4G6	2542 aa		11.92	□□□□□ -0.5
MATR3-238	ENST00000512107	TMEM30CP	A0ZSE6	113 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	MEIOC	A2RUB1	952 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	FAM172BP	A6NC97	362 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	FSHB	P01225	129 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	LIPF	P07098	398 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	IGHV4-38-2	P0DP08	117 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	GLP1R	P43220	463 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	TAS2R20	P59543	309 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	MEF2C	Q06413	473 aa	Predicted RBP	11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	METTL11B	Q5VVY1	283 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	VMO1	Q7Z5L0	202 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	PDZD9	Q8IXQ8	264 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	OR1L1	Q8NH94	360 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	RFESD	Q8TAC1	157 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	WDFY2	Q96P53	400 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	C7orf69	Q9H7B7	122 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	AUNIP	Q9H7T9	357 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	ZNRD1	Q9P1U0	126 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	LINC00312	Q9Y6C7	94 aa		11.91	□□□□□ -0.5
MATR3-238	ENST00000512107	NIPBL	Q6KC79	2804 aa	eCLIP	11.9	□□□□□ -0.5	1e-27	■■□□□ 13.5
MATR3-238	ENST00000512107	METTL21EP	A6NDL7	271 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	C12orf77	C9JDV5	145 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	XRCC3	O43542	346 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	APOA1	P02647	267 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	FCER2	P06734	321 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	ZNF728	P0DKX0	622 aa		11.9	□□□□□ -0.5
MATR3-238	ENST00000512107	HOXB4	P17483	251 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms