RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 MPV17LQ2QL34 196 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 LIPKQ5VXJ0 399 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 TMEM91Q6ZNR0 172 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 LINC00596Q86U02 117 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 OR13A1Q8NGR1 328 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 SGMS2Q8NHU3 365 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 PHYHIPQ92561 330 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 UQCC2Q9BRT2 126 aa13.03□□□□□ -0.32
PDLIM5-216ENST00000511767 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 MT-ND4P03905 459 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 UCHL1P09936 223 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 GZMHP20718 246 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 KRTAP10-3P60369 221 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 SRSF4Q08170 494 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM189A2Q15884 450 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 CCBE1Q6UXH8 406 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 TMEM104Q8NE00 496 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 OR4P4Q8NGL7 312 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 MGLLQ99685 303 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 CCDC90BQ9GZT6 254 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 TCF7L1Q9HCS4 588 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 DPM3Q9P2X0 92 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 RNF114Q9Y508 228 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
PDLIM5-216ENST00000511767 LY6LH3BQJ8 138 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 DENRO43583 198 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 CPEP16870 476 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 JUNBP17275 347 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 HTR1DP28221 377 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 DYNLT3P51808 116 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 PROK1P58294 105 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 MLLT11Q13015 90 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 ATAD3CQ5T2N8 411 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 AWAT2Q6E213 333 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 DHRS7BQ6IAN0 325 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 NKAIN3Q8N8D7 197 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 RFESDQ8TAC1 157 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 UFD1Q92890 307 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 BANF2Q9H503 90 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 ZNF286AQ9HBT8 521 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 CALYQ9NYX4 217 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 FBLN5Q9UBX5 448 aa13.01□□□□□ -0.33
PDLIM5-216ENST00000511767 PKD1L1Q8TDX9 2849 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 MGAM2Q2M2H8 2515 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 A6NDX4 124 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A22PA8MWA6 464 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 PRRX1P54821 245 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 PLA1AQ53H76 456 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 GLT8D1Q68CQ7 371 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 SIGIRRQ6IA17 410 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 ZNF596Q8TC21 504 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 MRGPRDQ8TDS7 321 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 KIRREL1Q96J84 757 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 IDI2-AS1Q9NZ38 188 aa13□□□□□ -0.33
PDLIM5-216ENST00000511767 RCC2Q9P258 522 aaKnown RBP13□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A10PA6NDY2 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A18PA6NE21 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A16PA6NEW6 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A20PA6NIJ5 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A12PA8MX19 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A5PA8MXJ8 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 LEUTXA8MZ59 168 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 TOR1AO14656 332 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 CHST1O43916 411 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 IL1AP01583 271 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 GLAP06280 429 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A15PP0C7V4 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A13PP0C7W8 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A14PP0C7W9 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM90A24PP0C7X0 464 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 MGMTP16455 207 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 NFYBP25208 207 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 RPS25P62851 125 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 EMX1Q04741 257 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 TRAM1Q15629 374 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 ZNF497Q6ZNH5 498 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 SLC16A12Q6ZSM3 486 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 GAPTQ8N292 157 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 NDNFQ8TB73 568 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 ACOT13Q9NPJ3 140 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 TCF19Q9Y242 345 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 PEX16Q9Y5Y5 336 aa12.99□□□□□ -0.33
PDLIM5-216ENST00000511767 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 MCRIP1C9JLW8 97 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 C15orf65H3BRN8 121 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms