RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 GPR176Q14439 515 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 MED22Q15528 200 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 FAM27D1Q5T7N8 215 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 LINC00596Q86U02 117 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF565Q8N9K5 539 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 RAB18Q9NP72 206 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 PCDHB16Q9NRJ7 776 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 FBLN5Q9UBX5 448 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 TCF19Q9Y242 345 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 A6NDX4 124 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 RGS10O43665 173 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 HTR1DP28221 377 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 GLP1RP43220 463 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 HSPA13P48723 471 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 LRRTM1Q86UE6 522 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 NKAIN3Q8N8D7 197 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 NDNFQ8TB73 568 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 MRPS24Q96EL2 167 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 TMED9Q9BVK6 235 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 ABCB10Q9NRK6 738 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 RCC2Q9P258 522 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 TRAV39A0A0B4J263 110 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 FAM90A22PA8MWA6 464 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 IL1AP01583 271 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 GABRA5P31644 462 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 TPBGQ13641 420 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 LIPKQ5VXJ0 399 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 AWAT2Q6E213 333 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 PRSS48Q7RTY5 328 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 TMEM104Q8NE00 496 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF596Q8TC21 504 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 UQCC2Q9BRT2 126 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 RANBP3Q9H6Z4 567 aaPredicted RBP9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
SH3RF1-205ENST00000511421 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 LY6LH3BQJ8 138 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 UCHL1P09936 223 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 CD37P11049 281 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 NFYBP25208 207 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 SSTR5P35346 364 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 ATAD3CQ5T2N8 411 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 TMEM91Q6ZNR0 172 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 CEACAM19Q7Z692 300 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 TMEM219Q86XT9 240 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 RFESDQ8TAC1 157 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 PHYHIPQ92561 330 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 UFD1Q92890 307 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 BANF2Q9H503 90 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 ISYNA1Q9NPH2 558 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 RAB26Q9ULW5 256 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 CMYA5Q8N3K9 4069 aa9.34□□□□□ -0.91
SH3RF1-205ENST00000511421 TMEM30CPA0ZSE6 113 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 MT-ND4P03905 459 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 MGMTP16455 207 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 SRMP19623 302 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 MAP2K4P45985 399 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 EFNB2P52799 333 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 MLLT11Q13015 90 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 RBM48Q5RL73 367 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 C1orf100Q5SVJ3 147 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 SIGIRRQ6IA17 410 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 ZNF497Q6ZNH5 498 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 OR10A7Q8NGE5 316 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 OR4C13Q8NGP0 309 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 OR9G1Q8NH87 305 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 Q96M66 194 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 NPFFR1Q9GZQ6 430 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 CCDC90BQ9GZT6 254 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 MMP28Q9H239 520 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 ZNF702PQ9H963 129 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 SPACA1Q9HBV2 294 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 TCF7L1Q9HCS4 588 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 PITPNC1Q9UKF7 332 aa9.33□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms