RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ZADH2Q8N4Q0 377 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 NRXN3Q9Y4C0 1643 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 GLI3P10071 1580 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 ZC3H12DA2A288 527 aaKnown RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 CNTD2Q9H8S5 307 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 H0Y980 276 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 C17orf99Q6UX52 265 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 TCF23Q7RTU1 214 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 KLF3P57682 345 aaPredicted RBP7.42□□□□□ -1.22
HTT-208ENST00000510626 NKG7Q16617 165 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SPATA45Q537H7 98 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 AMY1AP04745 511 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 FAM27D1Q5T7N8 215 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 PNKDQ8N490 385 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 TMEM45BQ96B21 275 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 OR6C1Q96RD1 312 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 RHNO1Q9BSD3 238 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 FUT9Q9Y231 359 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 C5orf49A4QMS7 147 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 MICBQ29980 383 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 HIKESHIQ53FT3 197 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 HOGA1Q86XE5 327 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 A0A0B4J293 547 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 BMPR1BO00238 502 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 ADAMTS17Q8TE56 1095 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 PIPOXQ9P0Z9 390 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SLC25A17O43808 307 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 FGF17O60258 216 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 GUCA2AQ02747 115 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 MYBPHQ13203 477 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 SFXN3Q9BWM7 321 aa7.42□□□□□ -1.22
HTT-208ENST00000510626 GRPP07492 148 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 DIRC2Q96SL1 478 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PECRQ9BY49 303 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TAF1P21675 1872 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 STARD6P59095 220 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 KIAA0040Q15053 153 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 RGS7BPQ6MZT1 257 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 BHLHE23Q8NDY6 225 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 LRP5O75197 1615 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PMP22Q01453 160 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TMEM267Q0VDI3 215 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 NCMAPQ5T1S8 102 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 DTD1Q8TEA8 209 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TRBV5-3A0A0A0MS03 114 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 OR2W5A6NFC9 320 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 SYNGR2O43760 224 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 CFDP00746 253 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 PRSS1P07477 247 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ZNF124Q15973 351 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 SARAFQ96BY9 339 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 IL17BQ9UHF5 180 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 NEURL1O76050 574 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TTRP02766 147 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 OR1D5P58170 312 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 MRPL58Q14197 206 aaKnown RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 PAPPA-AS1Q5QFB9 102 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PTPMT1Q8WUK0 201 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 CNRIP1Q96F85 164 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 RSRP1Q9BUV0 290 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 VN1R1Q9GZP7 353 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 RBKSQ9H477 322 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 CLEC12BQ2HXU8 276 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 POC1AQ8NBT0 407 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 DANCRP0C864 163 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 UBE2L3P68036 154 aaKnown RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 RAE1P78406 368 aaKnown RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 HES1Q14469 280 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ZNF385CQ66K41 422 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 D2HGDHQ8N465 521 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 HHIPQ96QV1 700 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ARG1P05089 322 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 CXCL3P19876 107 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PRRX1P54821 245 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 SEC11AP67812 179 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 MRGPREQ86SM8 312 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 FAHP16930 419 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TMEM215Q68D42 235 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ELSPBP1Q96BH3 223 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 GPX7Q96SL4 187 aaPredicted RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 KIRREL2Q6UWL6 708 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 SLC36A1Q7Z2H8 476 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 TMEM230Q96A57 120 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PRDM7Q9NQW5 492 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PTPRQQ9UMZ3 2332 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 GYPAP02724 150 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PROCRQ9UNN8 238 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 DDX60LQ5H9U9 1706 aaKnown RBP7.41□□□□□ -1.22
HTT-208ENST00000510626 PLPP3O14495 311 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 PIAS2O75928 621 aa7.41□□□□□ -1.22
HTT-208ENST00000510626 NXPH3O95157 252 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms