RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TRDCB7Z8K6 153 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 DTYMKP23919 212 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 G0S2P27469 103 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 CCL20P78556 96 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 ZNF816Q0VGE8 651 aaPredicted RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 FAM185AQ8N0U4 392 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 OBP2BQ9NPH6 170 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 VDAC1P21796 283 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 NPBWR2P48146 333 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 UBE2NP61088 152 aaKnown RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 H3F3AP84243 136 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 POC1BQ8TC44 478 aa12.92□□□□□ -0.34
USP38-202ENST00000510377 PACRGQ96M98 296 aaPredicted RBP12.92□□□□□ -0.34
USP38-202ENST00000510377 CXorf65A6NEN9 183 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 MSMO1Q15800 293 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 EXT1Q16394 746 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 GCM1Q9NP62 436 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
USP38-202ENST00000510377 A0A0U1RQV5 110 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 CD5P06127 495 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 RPS23P62266 143 aaKnown RBP12.91□□□□□ -0.34
USP38-202ENST00000510377 QRFPP83859 136 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 SPEM2Q0P670 501 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 OR10D3Q8NH80 312 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 CHRNA7P36544 502 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.91□□□□□ -0.34
USP38-202ENST00000510377 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
USP38-202ENST00000510377 ARV1Q9H2C2 271 aa12.91□□□□□ -0.34
USP38-202ENST00000510377 IGSF23A1L1A6 192 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 CDS2O95674 445 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 CTXN2P0C2S0 81 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 CYB561P49447 251 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 LYZL4Q96KX0 146 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 SAMD10Q9BYL1 202 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 KIAA1456Q9P272 454 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 GDF9O60383 454 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 GABRA4P48169 554 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 KCNIP4Q6PIL6 250 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 CLDN23Q96B33 292 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 TUBG2Q9NRH3 451 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 KIF26AQ9ULI4 1882 aaPredicted RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 MMP7P09237 267 aaPredicted RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 PGA5P0DJD9 388 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 RAC1P63000 192 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 SRSF4Q08170 494 aaKnown RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 MRPL49Q13405 166 aaKnown RBP12.9□□□□□ -0.34
USP38-202ENST00000510377 PHYHD1Q5SRE7 291 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.34
USP38-202ENST00000510377 XKRY2A2RUG3 117 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 TAS2R30P59541 319 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 CLN3Q13286 438 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 OR2V1Q8NHB1 315 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 IFI44Q8TCB0 444 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.35
USP38-202ENST00000510377 ATP5SQ99766 215 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 NUDT16L1Q9BRJ7 211 aaKnown RBP12.9□□□□□ -0.35
USP38-202ENST00000510377 UCK1Q9HA47 277 aa12.9□□□□□ -0.35
USP38-202ENST00000510377 C5orf52A6NGY3 159 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 OR5H1A6NKK0 313 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 GABRA2P47869 451 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
USP38-202ENST00000510377 PIGBOS1A0A0B4J2F0 54 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 ZNF737O75373 536 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 PSG2P11465 335 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 CCL4P13236 92 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 MPZP25189 248 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 MPLP40238 635 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 ENDOGQ14249 297 aaKnown RBP12.89□□□□□ -0.35
USP38-202ENST00000510377 CA5BP1Q8WTZ4 195 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 BOKQ9UMX3 212 aaPredicted RBP12.89□□□□□ -0.35
USP38-202ENST00000510377 YKT6O15498 198 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 HEXAP06865 529 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
USP38-202ENST00000510377 PSG4Q00888 419 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 DMBX1Q8NFW5 382 aa12.89□□□□□ -0.35
USP38-202ENST00000510377 ROS1P08922 2347 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 SRSF10O75494 262 aaKnown RBP12.88□□□□□ -0.35
USP38-202ENST00000510377 CA6P23280 308 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 CXorf67Q86X51 503 aaPredicted RBP12.88□□□□□ -0.35
USP38-202ENST00000510377 APH1AQ96BI3 265 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 ZNF320A2RRD8 509 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 IL24Q13007 206 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
USP38-202ENST00000510377 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms