RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 NRIP2Q9BQI9 281 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 GSX2Q9BZM3 304 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 PLK3Q9H4B4 646 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 TRDCB7Z8K6 153 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 PRRG2O14669 202 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 FAM76BQ5HYJ3 339 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 SLC5A7Q9GZV3 580 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
PHF3-209ENST00000509330 OR2S2Q9NQN1 319 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
PHF3-209ENST00000509330 POLEQ07864 2286 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 A0A0G2JNJ9 132 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 SPRY3O43610 288 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 BCL2L14Q9BZR8 327 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 NMES1Q9C002 83 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 ZC4H2Q9NQZ6 224 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 Q9UFV3 132 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 ATP23Q9Y6H3 246 aa12.59□□□□□ -0.39
PHF3-209ENST00000509330 DIDO1Q9BTC0 2240 aaKnown RBP12.58□□□□□ -0.39
PHF3-209ENST00000509330 J3QW42 95 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 HSPA12AO43301 675 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 HAND1O96004 215 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 HOXB1P14653 301 aaPredicted RBP12.58□□□□□ -0.4
PHF3-209ENST00000509330 SRSF4Q08170 494 aaKnown RBP12.58□□□□□ -0.4
PHF3-209ENST00000509330 ACOT7LQ6ZUV0 252 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 LDLRAD3Q86YD5 345 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 C11orf53Q8IXP5 236 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 POC1AQ8NBT0 407 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 OR1S1Q8NH92 325 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 GLYATL2Q8WU03 294 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 ST8SIA2Q92186 375 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 C2orf50Q96LR7 162 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 SPACA1Q9HBV2 294 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 K7ENP7 123 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.4
PHF3-209ENST00000509330 CRYAAP02489 173 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 SLC25A4P12235 298 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 ECI1P42126 302 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 AESQ08117 197 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 TMEM187Q14656 261 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 KRTCAP3Q53RY4 240 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 TBC1D26Q86UD7 250 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 SLC38A6Q8IZM9 456 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 OR51H1Q8NH63 302 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 DECR2Q9NUI1 292 aa12.58□□□□□ -0.4
PHF3-209ENST00000509330 ERRFI1Q9UJM3 462 aaPredicted RBP12.58□□□□□ -0.4
PHF3-209ENST00000509330 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
PHF3-209ENST00000509330 CHD3Q12873 2000 aaKnown RBP12.57□□□□□ -0.4
PHF3-209ENST00000509330 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.57□□□□□ -0.4
PHF3-209ENST00000509330 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 IL13RA2Q14627 380 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 KCNRGQ8N5I3 272 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 PLPPR2Q96GM1 343 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 KIR2DS1A0A191URI9 304 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 ZSCAN5BA6NJL1 495 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 IFNA21P01568 189 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 TIMP3P35625 211 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 TDGF1P3P51864 188 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 WDR82Q6UXN9 313 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 SLC51BQ86UW2 128 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 OR10J5Q8NHC4 309 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 ASB13Q8WXK3 278 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 CXXC4Q9H2H0 198 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 I3L521 148 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 SH2D1BO14796 132 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 CYCSP99999 105 aaKnown RBP12.57□□□□□ -0.4
PHF3-209ENST00000509330 LTC4SQ16873 150 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 TIMM23BQ5SRD1 257 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 TMEM65Q6PI78 240 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
PHF3-209ENST00000509330 UBE2J1Q9Y385 318 aaPredicted RBP12.57□□□□□ -0.4
PHF3-209ENST00000509330 A0A0D9SG52 128 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 A8MXE2 369 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 BCL2L11O43521 198 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 CCKARP32238 428 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 HLA-DRB3P79483 266 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 CLLU1Q5K131 121 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 PCSK4Q6UW60 755 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 LRRC29Q8WV35 223 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 MPPED1O15442 326 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 OR2F2O95006 317 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 GABRA2P47869 451 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 OR2F1Q13607 317 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 ZNF324BQ6AW86 544 aaPredicted RBP12.56□□□□□ -0.4
PHF3-209ENST00000509330 PIK3IP1Q96FE7 263 aa12.56□□□□□ -0.4
PHF3-209ENST00000509330 USB1Q9BQ65 265 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms