RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 TTRP02766 147 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 CTLA4P16410 223 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF20P17024 532 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC6A8P48029 635 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC11A1P49279 550 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 KRTDAPP60985 99 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 DPTQ07507 201 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 MLF2Q15773 248 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 EXT1Q16394 746 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 OR5AS1Q8N127 324 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC38A9Q8NBW4 561 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 OR5D18Q8NGL1 313 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 NT5CQ8TCD5 201 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 PSMF1Q92530 271 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM71F1Q96KD3 344 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 MEGF9Q9H1U4 602 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 B3GALT1Q9Y5Z6 326 aa8.68□□□□□ -1.02
PDGFRA-207ENST00000509092 A0A0C4DFX4 3053 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 SPINT1O43278 529 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 BLVRBP30043 206 aaPredicted RBP8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 LHX2P50458 406 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 RIPPLY3P57055 190 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF154Q13106 437 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 TRIM61Q5EBN2 209 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 FFAR4Q5NUL3 377 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 VN1R4Q7Z5H5 301 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 NIT1Q86X76 327 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 PLPPR1Q8TBJ4 325 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF596Q8TC21 504 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 SPIN2AQ99865 258 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 SPIN2BQ9BPZ2 258 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 SLC46A2Q9BY10 475 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 LIME1Q9H400 295 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 FAM206AQ9NX38 181 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 ELOVL5Q9NYP7 299 aa8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 PHF3Q92576 2039 aaKnown RBP8.67□□□□□ -1.02
PDGFRA-207ENST00000509092 J3QW42 95 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 PHF1O43189 567 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 FOXS1O43638 330 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 GDF9O60383 454 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SMPD2O60906 423 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 TOX4O94842 621 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 GPR75O95800 540 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SERPINA7P05543 415 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 CD99P14209 185 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 CMPK1P30085 196 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 RPL27P61353 136 aaKnown RBP8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 PLPPR5Q32ZL2 321 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 LRRC10Q5BKY1 277 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 CBLN3Q6UW01 205 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 TCF24Q7RTU0 167 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SIGLECL1Q8N7X8 197 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SUMF1Q8NBK3 374 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 ZDHHC11Q9H8X9 412 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 ANXA10Q9UJ72 324 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 C11orf98E9PRG8 122 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 CORTO00230 105 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 C8AP07357 584 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 CRISP2P16562 243 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 GABRA2P47869 451 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SRPXP78539 464 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 FOXL1Q12952 345 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 DEFB134Q4QY38 66 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 OR4A47Q6IF82 309 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 PSMG3Q9BT73 122 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 TMEM74BQ9NUR3 256 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 MCTS1Q9ULC4 181 aaKnown RBP8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 ARID1BQ8NFD5 2236 aaPredicted RBP8.66□□□□□ -1.02
PDGFRA-207ENST00000509092 SHISA7A6NL88 538 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 C9orf172C9J069 976 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 VAMP5O95183 116 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MPZL1O95297 269 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 WNT2P09544 360 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 SMIM10L1P0DMW3 83 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 GLI4P10075 376 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF823P16415 610 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 PEBP1P30086 187 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MDH2P40926 338 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 ACKR1Q16570 336 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 PRAMEF20Q5VT98 475 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 CCDC71LQ8N9Z2 235 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 CADM4Q8NFZ8 388 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 MRPL30Q8TCC3 161 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 SMIM10Q96HG1 83 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 COX14Q96I36 57 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 PBOV1Q9GZY1 135 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 ZNF286AQ9HBT8 521 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 NECAP2Q9NVZ3 263 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 PLA2G3Q9NZ20 509 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 NXT1Q9UKK6 140 aaKnown RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 VDAC3Q9Y277 283 aa8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 LOC102724200A0A096LPH7 203 aaPredicted RBP8.65□□□□□ -1.02
PDGFRA-207ENST00000509092 NPBWR2P48146 333 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms