RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RPL23AP62750 156 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 RHOGP84095 191 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF85Q03923 595 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TGM3Q08188 693 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PPP1R1AQ13522 171 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TRA2AQ13595 282 aaKnown RBP eCLIP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 IL13RA2Q14627 380 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 INSL4Q14641 139 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 AMZ1Q400G9 498 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 COX19Q49B96 90 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PDZD11Q5EBL8 140 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 VAX1Q5SQQ9 334 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 FAM27D1Q5T7N8 215 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PIP5KL1Q5T9C9 394 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PLPP4Q5VZY2 271 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 RPL7L1Q6DKI1 246 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TMEM225Q6GV28 225 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 LEG1Q6P5S2 330 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF836Q6ZNA1 936 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 NUP54Q7Z3B4 507 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SCD5Q86SK9 330 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SLC35F2Q8IXU6 374 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PIANPQ8IYJ0 282 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TMEM99Q8N816 258 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CYB561A3Q8NBI2 242 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 C17orf47Q8NEP4 570 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 OR4D5Q8NGN0 318 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SCAMP5Q8TAC9 235 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 FNDC9Q8TBE3 224 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CASTOR1Q8WTX7 329 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 C2orf15Q8WU43 125 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PTPMT1Q8WUK0 201 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 MRPL24Q96A35 216 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 FAM3DQ96BQ1 224 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PELI1Q96FA3 418 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 ABHD14BQ96IU4 210 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 JSRP1Q96MG2 331 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 FOXN4Q96NZ1 517 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 IL17FQ96PD4 163 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 ALKBH3Q96Q83 286 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SLC6A7Q99884 636 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 RNF126Q9BV68 326 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 NPFFR1Q9GZQ6 430 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 BANF2Q9H503 90 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PDFQ9HBH1 243 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TMEM9BQ9NQ34 198 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PLEK2Q9NYT0 353 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 MRPL27Q9P0M9 148 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF230Q9UIE0 474 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 C19orf53Q9UNZ5 99 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PSG11Q9UQ72 335 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 MYO16Q9Y6X6 1858 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SCN10AQ9Y5Y9 1956 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 WDFY3Q8IZQ1 3526 aa3.9□□□□□ -1.78
PDLIM5-211ENST00000508531 DSPP15924 2871 aaKnown RBP3.9□□□□□ -1.78
PDLIM5-211ENST00000508531 GREB1Q4ZG55 1949 aa3.9□□□□□ -1.78
PDLIM5-211ENST00000508531 HELZ2Q9BYK8 2649 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CEP295Q9C0D2 2601 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 IGHV1-69-2A0A0G2JMI3 117 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ANKUB1A6NFN9 424 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HIDE1A8MVS5 230 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 J3QR89 54 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PEX12O00623 359 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HSD17B6O14756 317 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 GEMIN2O14893 280 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF264O43296 627 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 COCHO43405 550 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TRAF3IP2O43734 574 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SOX15O60248 233 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 RAMP3O60896 148 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 DEDDO75618 318 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ACTL6BO94805 426 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 VENTXO95231 258 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 GOSR1O95249 250 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SEMA4FO95754 770 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HRASP01112 189 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HLA-HP01893 362 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SRP19P09132 144 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CXCL1P09341 107 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ZNF735P0CB33 412 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 GIMD1P0DJR0 217 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SMIM17P0DL12 118 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 ESDP10768 282 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CTSEP14091 401 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 LMO2P25791 158 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CD1BP29016 333 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SERPINA4P29622 427 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CMPK1P30085 196 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 RBMXP38159 391 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PDX1P52945 283 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 TAS2R46P59540 309 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 RPS11P62280 158 aaKnown RBP eCLIP3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 SRPXP78539 464 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 CRMP1Q14194 572 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 IHHQ14623 411 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
PDLIM5-211ENST00000508531 C18orf21Q32NC0 220 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms