RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MGLLQ99685 303 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 RHOFQ9HBH0 211 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 NEK6Q9HC98 313 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 ZNF581Q9P0T4 197 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 RSL24D1Q9UHA3 163 aaKnown RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 DHDHQ9UQ10 334 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 SIRT4Q9Y6E7 314 aaPredicted RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 F2RL2O00254 374 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 GABRPO00591 440 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 DEGS1O15121 323 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 TMEM225BP0DP42 221 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 CD34P28906 385 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 GBX2P52951 348 aaPredicted RBP12.98□□□□□ -0.33
LMNA-222ENST00000508500 MED22Q15528 200 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 KRBOX4Q5JUW0 171 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 SAMD5Q5TGI4 173 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 ZNF485Q8NCK3 441 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 YIPF6Q96EC8 236 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 GAL3ST2Q9H3Q3 398 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 DPM3Q9P2X0 92 aa12.98□□□□□ -0.33
LMNA-222ENST00000508500 A0A087X0M5 115 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 TRAV24A0A0B4J272 114 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 A0A1B0GX30 115 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 LY6LH3BQJ8 138 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 CCRL2O00421 344 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 FBXO24O75426 580 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 LALBAP00709 142 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 SOX2P48431 317 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 MTNR1BP49286 362 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 TPBGQ13641 420 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 RTN4RL2Q86UN3 420 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 CLVS1Q8IUQ0 354 aaPredicted RBP12.97□□□□□ -0.33
LMNA-222ENST00000508500 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 Q8NFD4 153 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 PXT1Q8NFP0 134 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 OR51T1Q8NGJ9 327 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 PLPPR1Q8TBJ4 325 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 TSEN15Q8WW01 171 aaKnown RBP12.97□□□□□ -0.33
LMNA-222ENST00000508500 ORAI1Q96D31 301 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
LMNA-222ENST00000508500 MMP28Q9H239 520 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 TAS2R4Q9NYW5 299 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 CLEC2DQ9UHP7 191 aa12.97□□□□□ -0.33
LMNA-222ENST00000508500 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 AMY1AP04745 511 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 AMY2AP04746 511 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 CD1AP06126 327 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 CPEP16870 476 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 HLA-DRB5Q30154 266 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
LMNA-222ENST00000508500 DTX3Q8N9I9 347 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 KIRREL1Q96J84 757 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 BABAM2Q9NXR7 383 aa12.96□□□□□ -0.33
LMNA-222ENST00000508500 CCDC160A6NGH7 325 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
LMNA-222ENST00000508500 HSPB6O14558 160 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 GABARAPO95166 117 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 CD36P16671 472 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 RAB3AP20336 220 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 GALP22466 123 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 PTGFRP43088 359 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 OR3A4PP47883 348 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 TRAM1Q15629 374 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 PIGYQ3MUY2 71 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 CCDC58Q4VC31 144 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 GPR107Q5VW38 600 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 FOXB2Q5VYV0 432 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 OR13C5Q8NGS8 318 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 ZNF596Q8TC21 504 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 UFD1Q92890 307 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
LMNA-222ENST00000508500 KBTBD11-OT1A0A1B0GTJ5 212 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 SH2D7A6NKC9 451 aaPredicted RBP12.94□□□□□ -0.34
LMNA-222ENST00000508500 LEUTXA8MZ59 168 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 OGG1O15527 345 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 CDRT1O95170 752 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 PSMA1P25786 263 aaKnown RBP12.94□□□□□ -0.34
LMNA-222ENST00000508500 VDAC2P45880 294 aaPredicted RBP12.94□□□□□ -0.34
LMNA-222ENST00000508500 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 TPTE2P1Q5T6R2 138 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 RSBN1Q5VWQ0 802 aaPredicted RBP12.94□□□□□ -0.34
LMNA-222ENST00000508500 RPL22L1Q6P5R6 122 aaKnown RBP12.94□□□□□ -0.34
LMNA-222ENST00000508500 LIN7BQ9HAP6 207 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 NDUFB11Q9NX14 153 aa12.94□□□□□ -0.34
LMNA-222ENST00000508500 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms