RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ADARB1P78563 741 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 SCGB2A2Q13296 93 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ALKBH1Q13686 389 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 ZSCAN26Q16670 478 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 OR2G6Q5TZ20 316 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 GPR157Q5UAW9 335 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ZNF691Q5VV52 312 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 TMEM244Q5VVB8 128 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 XAF1Q6GPH4 301 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 LAIR2Q6ISS4 152 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 C12orf54Q6X4T0 127 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FAM185AQ8N0U4 392 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 C3orf56Q8N813 242 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ZFP41Q8N8Y5 198 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 OR5D18Q8NGL1 313 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 OR13C9Q8NGT0 318 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FAM216AQ8WUB2 273 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 C17orf50Q8WW18 174 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 GGHQ92820 318 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 C12orf43Q96C57 262 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 ORAI1Q96D31 301 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 SDSLQ96GA7 329 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 NR1H4Q96RI1 486 aaPredicted RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 DCTN5Q9BTE1 182 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 CHST6Q9GZX3 395 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 MOB1AQ9H8S9 216 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 PLEKHA2Q9HB19 425 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 PLEKHA1Q9HB21 404 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 FGF20Q9NP95 211 aaPredicted RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 C19orf12Q9NSK7 152 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 RBFOX1Q9NWB1 397 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 RASL12Q9NYN1 266 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 ZNF222Q9UK12 451 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 HHLA2Q9UM44 414 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 RPL36Q9Y3U8 105 aaKnown RBP3.69□□□□□ -1.82
NUP54-206ENST00000508465 PCDHGB1Q9Y5G3 927 aa3.69□□□□□ -1.82
NUP54-206ENST00000508465 A0A087WYN8 130 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 IGKV1-12A0A0C4DH73 117 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 PNMA8CA0A1B0GUJ8 204 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 A0A1W2PPK0 400 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 SNTNA6NMZ2 147 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 DHRS7CA6NNS2 312 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 PTGES3LE9PB15 166 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 H0YAE9 185 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 SLC1A7O00341 560 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 NPFFO15130 113 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 MPZL2O60487 215 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 NOS1APO75052 506 aaPredicted RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 GATBO75879 557 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 LALBAP00709 142 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 IGKV1D-12P01611 117 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ISG15P05161 165 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 CLEC3BP05452 202 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 MELTFP08582 738 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 RPSAP08865 295 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 OCM2P0CE71 109 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 OCMP0CE72 109 aaPredicted RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 TMEM225BP0DP42 221 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 CCL3L1P16619 93 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 PRKACAP17612 351 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 GABRR1P24046 479 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 COX7A1P24310 79 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 MPZP25189 248 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 AZGP1P25311 298 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 CAPGP40121 348 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 POU3F4P49335 361 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 RBP2P50120 134 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ATP1B3P54709 279 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 CAV3P56539 151 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ERVK11-1P61568 191 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ACTA2P62736 377 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 RPL31P62899 125 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 ACTG2P63267 376 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ST3GAL4Q11206 333 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 RAB40BQ12829 278 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 IL24Q13007 206 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 PDZK1IP1Q13113 114 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 IL18R1Q13478 541 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 DCTN2Q13561 401 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 EDDM3AQ14507 147 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 SMIM21Q3B7S5 101 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 OGFRL1Q5TC84 451 aaPredicted RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 TTC23Q5W5X9 447 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 METAP1DQ6UB28 335 aaPredicted RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 TPRX1Q8N7U7 411 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 ASCC1Q8N9N2 400 aaKnown RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 BPIFB6Q8NFQ5 453 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 OR52N4Q8NGI2 321 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 OR13C5Q8NGS8 318 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 OR5AK2Q8NH90 309 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 RGP1Q92546 391 aaPredicted RBP3.68□□□□□ -1.82
NUP54-206ENST00000508465 SGCDQ92629 289 aa3.68□□□□□ -1.82
NUP54-206ENST00000508465 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms