RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 RFT1Q96AA3 541 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 CREB3L1Q96BA8 519 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 COQ2Q96H96 371 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 IFT22Q9H7X7 185 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 TMEM138Q9NPI0 162 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 ABCB10Q9NRK6 738 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 SERTAD4Q9NUC0 356 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 OR6C3Q9NZP0 311 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 DPM3Q9P2X0 92 aa6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 DIMT1Q9UNQ2 313 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-222ENST00000508238 TRAV24A0A0B4J272 114 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 KBTBD11-OT1A0A1B0GTJ5 212 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 ZNF729A6NN14 1252 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 LEUTXA8MZ59 168 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 LY6LH3BQJ8 138 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 GPX5O75715 221 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 TSPAN15O95858 294 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 HCKP08631 526 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 CSF1P09603 554 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 ZNF44P15621 663 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 CDK2P24941 298 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 PTGFRP43088 359 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 KCNJ3P48549 501 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 SNU13P55769 128 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 ADARB1P78563 741 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 IL13RA2Q14627 380 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 PDLIM3Q53GG5 364 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 NHLRC3Q5JS37 347 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 KRBOX4Q5JUW0 171 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 XAF1Q6GPH4 301 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 C16orf82Q7Z2V1 217 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 TRAPPC6BQ86SZ2 158 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 KLHDC1Q8N7A1 406 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 ZNF565Q8N9K5 539 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 OR51A2Q8NGJ7 313 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 OR52N1Q8NH53 320 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 CNIH3Q8TBE1 160 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 TSEN15Q8WW01 171 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 TMEM106AQ96A25 262 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 SMIM19Q96E16 107 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 S100A13Q99584 98 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 BARHL1Q9BZE3 327 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 PRSS22Q9GZN4 317 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 VCX3BQ9H321 246 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 DCLRE1BQ9H816 532 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 PAK1IP1Q9NWT1 392 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 IL36GQ9NZH8 169 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 EXOSC1Q9Y3B2 195 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 HILPDAQ9Y5L2 63 aa6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 SIRT4Q9Y6E7 314 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-222ENST00000508238 TRBV5-5A0A0J9YX44 114 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 EFCAB10A6NFE3 127 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 ERICH4A6NGS2 130 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OOSP1A8MZH6 123 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 NPIPB11E5RHQ5 1161 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 H0YJX3 145 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 BUB1B-PAK6H3BSN5 160 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 F2RL2O00254 374 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 GABRPO00591 440 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 ZNF780AO75290 641 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 CLIC3O95833 236 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OPN1MWP04001 364 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OPN1MW2P0DN77 364 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OPN1MW3P0DN78 364 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 BRS3P32247 399 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 CEACAM3P40198 252 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 ARHGDIBP52566 201 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 PRRX1P54821 245 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TAS2R43P59537 309 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 RPS11P62280 158 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 BLCAPP62952 87 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 EMX1Q04741 257 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 SLC34A1Q06495 639 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 SCN1BQ07699 218 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 GPR176Q14439 515 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 RSU1Q15404 277 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 C17orf58Q2M2W7 97 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 HLA-DRB5Q30154 266 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 PLA1AQ53H76 456 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 PRAMEF5Q5TYX0 476 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OR2G6Q5TZ20 316 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 DMKNQ6E0U4 476 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 SLC16A12Q6ZSM3 486 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TMEM219Q86XT9 240 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OR10A7Q8NGE5 316 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 OR4D6Q8NGJ1 314 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 NDNFQ8TB73 568 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TNFAIP8L1Q8WVP5 186 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 CYGBQ8WWM9 190 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 GHSRQ92847 366 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TMEM80Q96HE8 168 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TAS2R4Q9NYW5 299 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 CKLFQ9UBR5 152 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 CLEC2DQ9UHP7 191 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 FOXJ3Q9UPW0 622 aa6.37□□□□□ -1.39
UBE2D3-222ENST00000508238 TOR1AO14656 332 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms