RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TMEM56-RWDD3S4R434 201 aa14.96□□□□□ -0.02
SFXN1-208ENST00000507823 ASPMQ8IZT6 3477 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 LMO1P25800 156 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 NUP62P37198 522 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF718Q3SXZ3 478 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 PAN3Q58A45 887 aaKnown RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 TIMM23BQ5SRD1 257 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF474Q6S9Z5 364 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 C5orf24Q7Z6I8 188 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 H1FOOQ8IZA3 346 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 LHFPL5Q8TAF8 219 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 TP53RKQ96S44 253 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 TMEM222Q9H0R3 208 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 BARX1Q9HBU1 254 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 MBNL3Q9NUK0 354 aaKnown RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 GSKIPQ9P0R6 139 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 TMED3Q9Y3Q3 217 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 IGKV1D-13A0A0B4J2D9 117 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 C3orf85A0A1B0GTC6 90 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 KCNAB3O43448 404 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 IGKV1-13P0DP09 117 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF44P15621 663 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 Q6ZR03 302 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 LYZL2Q7Z4W2 148 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 HSD17B13Q7Z5P4 300 aaPredicted RBP14.95□□□□□ -0.02
SFXN1-208ENST00000507823 FAM57AQ8TBR7 257 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 SFXN3Q9BWM7 321 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 DNTTIP1Q9H147 329 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 TINAGQ9UJW2 476 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 WIPI2Q9Y4P8 454 aa14.95□□□□□ -0.02
SFXN1-208ENST00000507823 SPENQ96T58 3664 aaKnown RBP14.94□□□□□ -0.02
SFXN1-208ENST00000507823 MKRN2OSH3BPM6 223 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 BET1O15155 118 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 HKR1P10072 659 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 SNTB1Q13884 538 aaKnown RBP14.94□□□□□ -0.02
SFXN1-208ENST00000507823 PLPPR1Q8TBJ4 325 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 FBXO9Q9UK97 447 aaPredicted RBP14.94□□□□□ -0.02
SFXN1-208ENST00000507823 CFAP47Q6ZTR5 3102 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 C3orf80F5H4A9 247 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 SH2D1BO14796 132 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 TPT1P13693 172 aaKnown RBP14.94□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF818PQ6ZRF7 136 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 ZFP57Q9NU63 452 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 PFDN2Q9UHV9 154 aa14.94□□□□□ -0.02
SFXN1-208ENST00000507823 DUXBA0A1W2PPF3 345 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 A8MXK9 166 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 I3L521 148 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 TAAR5O14804 337 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 PHF1O43189 567 aaPredicted RBP14.93□□□□□ -0.02
SFXN1-208ENST00000507823 NXPH2O95156 264 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 FGF2P09038 288 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 RCC1P18754 421 aaPredicted RBP14.93□□□□□ -0.02
SFXN1-208ENST00000507823 RELL2Q8NC24 303 aaPredicted RBP14.93□□□□□ -0.02
SFXN1-208ENST00000507823 PRR7Q8TB68 274 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 OR2W1Q9Y3N9 320 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 PRR14LQ5THK1 2151 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 AKAP13Q12802 2813 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.93□□□□□ -0.02
SFXN1-208ENST00000507823 S100A10P60903 97 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 TBC1D26Q86UD7 250 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 BAP18Q8IXM2 172 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 RPRMLQ8N4K4 120 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF565Q8N9K5 539 aa14.93□□□□□ -0.02
SFXN1-208ENST00000507823 USB1Q9BQ65 265 aaKnown RBP14.93□□□□□ -0.02
SFXN1-208ENST00000507823 A0A1B0GW55 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 FGF16O43320 207 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 PTBP3O95758 552 aaKnown RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 MBPP02686 304 aaPredicted RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L2P0CJ85 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L3P0CJ86 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L4P0CJ87 422 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L5P0CJ88 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L6P0CJ89 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4L7P0CJ90 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 UCP1P25874 307 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 SECTM1Q8WVN6 248 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 COL25A1Q9BXS0 654 aaPredicted RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 DUX4Q9UBX2 424 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 PRRC2CQ9Y520 2896 aaKnown RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 TIMM8AO60220 97 aaPredicted RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 GRPP07492 148 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 ZNF250P15622 560 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 HMGN3Q15651 99 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 FIP1L1Q6UN15 594 aaKnown RBP14.92□□□□□ -0.02
SFXN1-208ENST00000507823 CCDC28AQ8IWP9 274 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 BVESQ8NE79 360 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 OR4D5Q8NGN0 318 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 LRRC20Q8TCA0 184 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 IL22RA2Q969J5 263 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 PLEKHA2Q9HB19 425 aa14.92□□□□□ -0.02
SFXN1-208ENST00000507823 K7EPK0 472 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 CDS2O95674 445 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 HAND1O96004 215 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 GCH1P30793 250 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 SMCO1Q147U7 214 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 FAM71E2Q8N5Q1 922 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 SLC35G3Q8N808 338 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 OR10J5Q8NHC4 309 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 KIRREL1Q96J84 757 aa14.91□□□□□ -0.02
SFXN1-208ENST00000507823 CLEC18AA5D8T8 446 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms