RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ACOT12Q8WYK0 555 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 DYRK2Q92630 601 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 UPRTQ96BW1 309 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 CMTM3Q96MX0 182 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 TBX15Q96SF7 602 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 FAAP24Q9BTP7 215 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 PECRQ9BY49 303 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ABCG5Q9H222 651 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 UNKLQ9H9P5 680 aaKnown RBP10.55□□□□□ -0.72
TCOF1-210ENST00000506767 PLEKHJ1Q9NW61 149 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ING3Q9NXR8 418 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 ETAA1Q9NY74 926 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 TAS2R3Q9NYW6 316 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 NDUFA13Q9P0J0 144 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
TCOF1-210ENST00000506767 KCNK7Q9Y2U2 307 aa10.55□□□□□ -0.72
TCOF1-210ENST00000506767 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 TOX4O94842 621 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 FSHBP01225 129 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 RBP4P02753 201 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 ZNF728P0DKX0 622 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 METTL11BQ5VVY1 283 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 CMTM4Q8IZR5 234 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 ZNF565Q8N9K5 539 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 OR13A1Q8NGR1 328 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 NEK7Q8TDX7 302 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 RAB3CQ96E17 227 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 ZNF714Q96N38 554 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 OR6C3Q9NZP0 311 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
TCOF1-210ENST00000506767 ONECUT1Q9UBC0 465 aa10.54□□□□□ -0.72
TCOF1-210ENST00000506767 TRGV10A0A0A0MS01 117 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 CCDC160A6NGH7 325 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 A6NJ64 397 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 ZNF729A6NN14 1252 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 INAFM1C9JVW0 142 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 MFNGO00587 321 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 SCGNO76038 276 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 NAPSAO96009 420 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 PRTN3P24158 256 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 SOX6P35712 828 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 KLF17Q5JT82 389 aaPredicted RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 UBE2NLQ5JXB2 153 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 OLFML2AQ68BL7 652 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 MRPL30Q8TCC3 161 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 AP3S1Q92572 193 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 TNFRSF14Q92956 283 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 DGCR14Q96DF8 476 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 MBNL3Q9NUK0 354 aaKnown RBP10.53□□□□□ -0.72
TCOF1-210ENST00000506767 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 AK3Q9UIJ7 227 aa10.53□□□□□ -0.72
TCOF1-210ENST00000506767 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 TRAV39A0A0B4J263 110 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 hCG_1809904A0A1W2PP81 198 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 A0A1W2PPE2 198 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 A0A1W2PR64 198 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 A0A1W2PRV1 198 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 NPIPB11E5RHQ5 1161 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 GNB3P16520 340 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 GZMHP20718 246 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 ERVFRD-1P60508 538 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 ARL6IP1Q15041 203 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 ZNF260Q3ZCT1 412 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 FOXB2Q5VYV0 432 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 HCP5Q6MZN7 132 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 MZT2AQ6P582 158 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 ZNF880Q6PDB4 577 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 Q6ZPA2 131 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 TRAPPC6BQ86SZ2 158 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 TEX29Q8N6K0 151 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 SAMD12Q8N8I0 201 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 OR4K15Q8NH41 348 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 SLIRPQ9GZT3 109 aaKnown RBP10.52□□□□□ -0.73
TCOF1-210ENST00000506767 GAL3ST2Q9H3Q3 398 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-210ENST00000506767 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 SVEP1Q4LDE5 3571 aa10.52□□□□□ -0.73
TCOF1-210ENST00000506767 WNK2Q9Y3S1 2297 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 A6NHS1 94 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 POM121CA8CG34 1229 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 C15orf65H3BRN8 121 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 XRCC3O43542 346 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 ORC5O43913 435 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms