RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 HCKP08631 526 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 RAB3AP20336 220 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 CDK2P24941 298 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 SOX2P48431 317 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 DEFA6Q01524 100 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 NHLRC3Q5JS37 347 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 RSBN1Q5VWQ0 802 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 C11orf88Q6PI97 169 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 GPR148Q8TDV2 347 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 TSEN15Q8WW01 171 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 TMEM106AQ96A25 262 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 YIPF6Q96EC8 236 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 BABAM2Q9NXR7 383 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 GLS2Q9UI32 602 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
PDLIM7-211ENST00000504318 TGP01266 2768 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 SLC22A1O15245 554 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 GPX5O75715 221 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 TMEM225BP0DP42 221 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 ZNF44P15621 663 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 CD36P16671 472 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 OR3A4PP47883 348 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 BLCAPP62952 87 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 MLLT11Q13015 90 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 SPHARQ15513 63 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 MED22Q15528 200 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 HLA-DRB5Q30154 266 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 PIGYQ3MUY2 71 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 KRBOX4Q5JUW0 171 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 RTN4RL2Q86UN3 420 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 ABHD12Q8N2K0 398 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 OR13A1Q8NGR1 328 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 OR10K1Q8NGX5 313 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 KIRREL1Q96J84 757 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 MGLLQ99685 303 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 OCSTAMPQ9BR26 566 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 GAL3ST2Q9H3Q3 398 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 IFT22Q9H7X7 185 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 NEK6Q9HC98 313 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 ISYNA1Q9NPH2 558 aa11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 LSM2Q9Y333 95 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-211ENST00000504318 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 TRBV5-7A0A0A0MS05 114 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM172BPA6NC97 362 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 NPIPB11E5RHQ5 1161 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 CCRL2O00421 344 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 DEGS1O15121 323 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 AMY1AP04745 511 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 AMY2AP04746 511 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 HTR1DP28221 377 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 WNT4P56705 351 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 TMPRSS11AQ6ZMR5 421 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 TRAPPC6BQ86SZ2 158 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 TNFAIP8L1Q8WVP5 186 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 GHSRQ92847 366 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 DPM3Q9P2X0 92 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
PDLIM7-211ENST00000504318 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 KBTBD11-OT1A0A1B0GTJ5 212 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 A0A1W2PP11 408 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 FUOMA2VDF0 154 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 CDRT1O95170 752 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 OCM2P0CE71 109 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 HSMCR30P0CW71 290 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 FSTP19883 344 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 PTGFRP43088 359 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 SCN1BQ07699 218 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 OR52W1Q6IF63 320 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 SLC16A12Q6ZSM3 486 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 ZFP41Q8N8Y5 198 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 CYYR1Q96J86 154 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 PITPNC1Q9UKF7 332 aa11.19□□□□□ -0.62
PDLIM7-211ENST00000504318 NOTCH3Q9UM47 2321 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A18PA6NE21 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A16PA6NEW6 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A20PA6NIJ5 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A9PA6NNJ1 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A12PA8MX19 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A5PA8MXJ8 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 HSPB6O14558 160 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 PIN1P1O15428 100 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 AIREO43918 545 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A15PP0C7V4 464 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms